Strain Fitness in Dechlorosoma suillum PS around Dsui_1204

Experiment: defined media with 30 mM sodium lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1202 and Dsui_1203 overlap by 23 nucleotidesDsui_1203 and Dsui_1204 are separated by 23 nucleotidesDsui_1204 and Dsui_1205 are separated by 136 nucleotidesDsui_1205 and Dsui_1206 are separated by 7 nucleotides Dsui_1202: Dsui_1202 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 1,255,197 to 1,255,940 _1202 Dsui_1203: Dsui_1203 - putative metal-dependent hydrolase, at 1,255,918 to 1,256,694 _1203 Dsui_1204: Dsui_1204 - lactoylglutathione lyase, at 1,256,718 to 1,257,104 _1204 Dsui_1205: Dsui_1205 - response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain, at 1,257,241 to 1,257,603 _1205 Dsui_1206: Dsui_1206 - hypothetical protein, at 1,257,611 to 1,258,219 _1206 Position (kb) 1256 1257 1258Strain fitness (log2 ratio) -1 0 1at 1256.077 kb on - strand, within Dsui_1203at 1256.089 kb on - strand, within Dsui_1203at 1256.121 kb on - strand, within Dsui_1203at 1256.166 kb on - strand, within Dsui_1203at 1256.171 kb on - strand, within Dsui_1203at 1256.181 kb on + strand, within Dsui_1203at 1256.384 kb on + strand, within Dsui_1203at 1256.392 kb on - strand, within Dsui_1203at 1256.430 kb on - strand, within Dsui_1203at 1256.430 kb on - strand, within Dsui_1203at 1256.646 kb on + strandat 1256.670 kb on + strandat 1256.759 kb on - strand, within Dsui_1204at 1256.769 kb on + strand, within Dsui_1204at 1256.769 kb on - strand, within Dsui_1204at 1256.892 kb on - strand, within Dsui_1204at 1256.911 kb on + strand, within Dsui_1204at 1256.929 kb on + strand, within Dsui_1204at 1257.034 kb on + strand, within Dsui_1204at 1257.214 kb on - strandat 1257.224 kb on - strandat 1257.339 kb on - strand, within Dsui_1205at 1257.436 kb on - strand, within Dsui_1205at 1257.447 kb on + strand, within Dsui_1205at 1257.540 kb on + strand, within Dsui_1205at 1257.588 kb on - strandat 1257.717 kb on - strand, within Dsui_1206at 1257.860 kb on - strand, within Dsui_1206at 1258.059 kb on + strand, within Dsui_1206at 1258.092 kb on - strand, within Dsui_1206

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Per-strain Table

Position Strand Gene LocusTag Fraction defined media with 30 mM sodium lactate
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1,256,077 - Dsui_1203 0.20 -0.1
1,256,089 - Dsui_1203 0.22 -0.5
1,256,121 - Dsui_1203 0.26 +1.0
1,256,166 - Dsui_1203 0.32 -0.7
1,256,171 - Dsui_1203 0.33 -1.6
1,256,181 + Dsui_1203 0.34 -0.0
1,256,384 + Dsui_1203 0.60 -0.2
1,256,392 - Dsui_1203 0.61 -0.4
1,256,430 - Dsui_1203 0.66 -1.0
1,256,430 - Dsui_1203 0.66 -0.5
1,256,646 + -1.0
1,256,670 + -0.1
1,256,759 - Dsui_1204 0.11 -0.9
1,256,769 + Dsui_1204 0.13 -0.7
1,256,769 - Dsui_1204 0.13 -0.7
1,256,892 - Dsui_1204 0.45 -0.2
1,256,911 + Dsui_1204 0.50 -0.9
1,256,929 + Dsui_1204 0.55 -0.8
1,257,034 + Dsui_1204 0.82 -0.6
1,257,214 - +0.0
1,257,224 - -0.5
1,257,339 - Dsui_1205 0.27 -0.6
1,257,436 - Dsui_1205 0.54 +0.1
1,257,447 + Dsui_1205 0.57 -0.4
1,257,540 + Dsui_1205 0.82 -0.4
1,257,588 - -0.5
1,257,717 - Dsui_1206 0.17 -0.2
1,257,860 - Dsui_1206 0.41 -1.5
1,258,059 + Dsui_1206 0.74 -0.2
1,258,092 - Dsui_1206 0.79 -1.3

Or see this region's nucleotide sequence