Experiment: defined media with 30 mM sodium lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0953 and Dsui_0954 are separated by 13 nucleotides Dsui_0954 and Dsui_0955 are separated by 381 nucleotides
Dsui_0953: Dsui_0953 - ADP-ribosyl-(dinitrogen reductase) hydrolase, at 978,577 to 979,500
_0953
Dsui_0954: Dsui_0954 - Dinitrogenase reductase ADP-ribosyltransferase (DRAT), at 979,514 to 980,365
_0954
Dsui_0955: Dsui_0955 - nitrogenase iron protein, at 980,747 to 981,622
_0955
Position (kb) 979
980
981 Strain fitness (log2 ratio) -2
-1
0
1
2 at 978.728 kb on - strand, within Dsui_0953 at 978.754 kb on - strand, within Dsui_0953 at 978.831 kb on + strand, within Dsui_0953 at 978.836 kb on - strand at 978.963 kb on + strand, within Dsui_0953 at 978.971 kb on - strand, within Dsui_0953 at 979.038 kb on - strand at 979.213 kb on + strand, within Dsui_0953 at 979.379 kb on - strand, within Dsui_0953 at 979.511 kb on + strand at 979.526 kb on + strand at 979.587 kb on - strand at 979.636 kb on + strand, within Dsui_0954 at 979.644 kb on - strand, within Dsui_0954 at 979.668 kb on - strand at 979.837 kb on + strand at 979.846 kb on + strand, within Dsui_0954 at 979.956 kb on + strand at 980.077 kb on - strand, within Dsui_0954 at 980.163 kb on + strand, within Dsui_0954 at 980.242 kb on - strand, within Dsui_0954 at 980.522 kb on + strand at 980.675 kb on - strand at 980.686 kb on - strand at 980.688 kb on + strand at 980.694 kb on + strand at 980.838 kb on - strand at 980.917 kb on - strand, within Dsui_0955 at 981.100 kb on - strand at 981.249 kb on - strand, within Dsui_0955 at 981.249 kb on - strand, within Dsui_0955 at 981.303 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction defined media with 30 mM sodium lactate remove 978,728 - Dsui_0953 0.16 -0.7 978,754 - Dsui_0953 0.19 +0.2 978,831 + Dsui_0953 0.27 -0.0 978,836 - +0.8 978,963 + Dsui_0953 0.42 +0.6 978,971 - Dsui_0953 0.43 +0.3 979,038 - +2.2 979,213 + Dsui_0953 0.69 +0.2 979,379 - Dsui_0953 0.87 +0.2 979,511 + +0.7 979,526 + -1.6 979,587 - -0.3 979,636 + Dsui_0954 0.14 -1.3 979,644 - Dsui_0954 0.15 -0.8 979,668 - -0.0 979,837 + +0.8 979,846 + Dsui_0954 0.39 -0.2 979,956 + +1.6 980,077 - Dsui_0954 0.66 -0.2 980,163 + Dsui_0954 0.76 +0.8 980,242 - Dsui_0954 0.85 +1.3 980,522 + +0.7 980,675 - +0.1 980,686 - +1.2 980,688 + -1.8 980,694 + -0.1 980,838 - +0.6 980,917 - Dsui_0955 0.19 +1.2 981,100 - -0.6 981,249 - Dsui_0955 0.57 +1.2 981,249 - Dsui_0955 0.57 -0.6 981,303 - +1.6
Or see this region's nucleotide sequence