Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0526

Experiment: MoYLS4 with Spectinomycin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_0525 and DvMF_0526 are separated by 271 nucleotidesDvMF_0526 and DvMF_0527 are separated by 235 nucleotides DvMF_0525: DvMF_0525 - quinolinate synthetase (RefSeq), at 619,280 to 620,329 _0525 DvMF_0526: DvMF_0526 - L-aspartate oxidase (RefSeq), at 620,601 to 622,193 _0526 DvMF_0527: DvMF_0527 - 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase (RefSeq), at 622,429 to 623,181 _0527 Position (kb) 620 621 622 623Strain fitness (log2 ratio) -1 0 1at 622.372 kb on - strandat 623.111 kb on + strandat 623.119 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Spectinomycin 0.025 mg/ml
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622,372 - -0.9
623,111 + -0.4
623,119 - -0.3

Or see this region's nucleotide sequence