Strain Fitness in Shewanella amazonensis SB2B around Sama_1508

Experiment: Uridine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Uridine
1,830,370	+				-0.2
1,830,371	-				+0.7
1,830,391	-				+0.5
1,830,407	-				+1.7
1,830,418	+				-0.1
1,830,418	+				-0.6
1,830,418	+				-0.6
1,830,418	+				+0.9
1,830,418	+				+0.9
1,830,419	-				+1.1
1,830,420	+				-1.1
1,830,420	+				-1.5
1,830,421	-				+0.2
1,830,496	+				-0.9
1,830,496	+				-0.3
1,830,496	+				+0.7
1,830,497	-				-0.3
1,830,497	-				+0.2
1,830,516	+				-0.3
1,830,588	-				-1.7
1,830,596	+				+0.8
1,830,596	+				+1.8
1,830,601	+				+0.3
1,830,601	+				-0.2
1,830,601	+				+0.8
1,830,601	+				-0.5
1,830,601	+				+1.7
1,830,602	-				-0.1
1,830,602	-				+0.5
1,830,602	-				+1.3
1,830,602	-				-0.5
1,830,604	-				-0.3
1,830,605	+				-0.4
1,830,605	+				-0.7
1,830,605	+				-0.2
1,830,605	+				-0.5
1,830,605	+				-1.0
1,830,606	-				+0.3
1,830,606	-				-0.0
1,830,669	+		Sama_1507	0.13	+1.2
1,830,670	-		Sama_1507	0.13	-1.5
1,830,670	-		Sama_1507	0.13	-1.1
1,830,670	-		Sama_1507	0.13	-0.7
1,830,702	-		Sama_1507	0.18	-0.9
1,830,770	-		Sama_1507	0.28	+0.5
1,830,945	+		Sama_1507	0.55	+1.7
1,830,945	+		Sama_1507	0.55	-1.1
1,830,945	+		Sama_1507	0.55	-0.1
1,830,945	+		Sama_1507	0.55	+0.9
1,830,945	+		Sama_1507	0.55	+0.7
1,830,945	+		Sama_1507	0.55	+1.4
1,830,946	-		Sama_1507	0.55	+0.9
1,830,946	-		Sama_1507	0.55	+0.3
1,831,014	+		Sama_1507	0.65	-0.8
1,831,014	+		Sama_1507	0.65	-1.3
1,831,137	+		Sama_1507	0.84	-0.0
1,831,137	+		Sama_1507	0.84	-1.8
1,831,137	+		Sama_1507	0.84	-0.3
1,831,138	-		Sama_1507	0.84	+0.3
1,831,138	-		Sama_1507	0.84	-0.2
1,831,159	+		Sama_1507	0.87	+0.1
1,831,160	-		Sama_1507	0.87	+0.2
1,831,162	-		Sama_1507	0.87	+0.1
1,831,241	+				-0.7
1,831,241	+				-0.4
1,831,242	-				-0.3
1,831,256	+				-0.5
1,831,257	-				-0.4
1,831,257	-				-0.9
1,831,311	-				-0.4
1,831,328	+				+0.1
1,831,328	+				-0.3
1,831,328	+				+1.3
1,831,328	+				+1.5
1,831,328	+				+0.1
1,831,329	-				-0.3
1,831,329	-				-0.2
1,831,329	-				+0.2
1,831,333	+				-0.8
1,831,333	+				-0.4
1,831,333	+				-0.5
1,831,333	+				-0.8
1,831,334	-				-2.1
1,831,334	-				+0.1
1,831,346	+				-0.8
1,831,347	-				-0.0
1,831,388	-				+0.5
1,831,401	-				-3.1
1,831,401	-				-3.3
1,831,441	-				-4.4
1,831,724	-		Sama_1508	0.39	-3.0
1,831,724	-		Sama_1508	0.39	-2.5
1,831,750	-		Sama_1508	0.42	-2.5
1,831,752	-		Sama_1508	0.42	-2.1
1,831,752	-		Sama_1508	0.42	-3.7
1,831,774	-		Sama_1508	0.44	-0.5
1,832,058	-		Sama_1508	0.74	-0.5
1,832,058	-		Sama_1508	0.74	-2.7
1,832,079	-		Sama_1508	0.76	-4.4
1,832,079	-		Sama_1508	0.76	-3.1
1,832,079	-		Sama_1508	0.76	-3.4
1,832,110	-		Sama_1508	0.79	-3.1
1,832,110	-		Sama_1508	0.79	-4.0
1,832,110	-		Sama_1508	0.79	-4.0
1,832,110	-		Sama_1508	0.79	-4.4
1,832,192	-		Sama_1508	0.87	-2.5
1,832,192	-		Sama_1508	0.87	-4.8
1,832,286	-				-2.1
1,832,337	-				-2.9
1,832,346	-				-1.4
1,832,346	-				+0.1
1,832,346	-				-0.3
1,832,346	-				-0.5
1,832,362	-				-1.8
1,832,362	-				-0.5
1,832,464	-				+0.1
1,832,477	+				-1.5
1,832,504	+				+0.6
1,832,504	+				+0.2
1,832,504	+				+0.3
1,832,504	+				+0.8
1,832,523	+				-0.4
1,832,523	+				+0.4
1,832,523	+				-0.8
1,832,524	-				-0.9
1,832,524	-				+0.3
1,832,524	-				-0.3
1,832,524	-				+0.2
1,832,524	-				+0.5
1,832,586	+				-0.5
1,832,587	-				-0.1
1,832,587	-				-0.2
1,832,587	-				-0.4
1,832,587	-				+0.8
1,832,590	-				+0.5
1,832,672	+		Sama_1509	0.13	-0.2
1,832,672	+		Sama_1509	0.13	-0.3
1,832,672	+		Sama_1509	0.13	+0.1
1,832,672	+		Sama_1509	0.13	-0.4
1,832,672	+		Sama_1509	0.13	-0.5
1,832,672	+		Sama_1509	0.13	+0.5
1,832,672	+		Sama_1509	0.13	+2.1
1,832,672	+		Sama_1509	0.13	+1.5
1,832,673	-		Sama_1509	0.13	-0.0
1,832,673	-		Sama_1509	0.13	-0.4
1,832,673	-		Sama_1509	0.13	+0.2
1,832,673	-		Sama_1509	0.13	-0.4
1,832,673	-		Sama_1509	0.13	+0.1
1,832,733	-		Sama_1509	0.19	+0.1
1,832,746	+		Sama_1509	0.20	+0.5
1,832,747	-		Sama_1509	0.20	-0.4
1,832,750	+		Sama_1509	0.20	-0.5
1,832,751	-		Sama_1509	0.20	-0.8
1,832,751	-		Sama_1509	0.20	+0.7
1,832,751	-		Sama_1509	0.20	+0.8
1,832,755	-		Sama_1509	0.20	-0.6
1,832,764	-		Sama_1509	0.21	+0.1
1,832,797	+		Sama_1509	0.24	+0.8
1,832,797	+		Sama_1509	0.24	+1.5
1,832,798	-		Sama_1509	0.24	-0.5
1,832,798	-		Sama_1509	0.24	-0.4
1,832,798	-		Sama_1509	0.24	+1.9
1,832,824	+		Sama_1509	0.27	-0.5
1,832,824	+		Sama_1509	0.27	+0.6
1,832,824	+		Sama_1509	0.27	-1.1
1,832,824	+		Sama_1509	0.27	-1.5
1,832,825	-		Sama_1509	0.27	-1.8
1,832,825	-		Sama_1509	0.27	-0.4
1,832,825	-		Sama_1509	0.27	+0.2
1,832,825	-		Sama_1509	0.27	-0.9
1,832,825	-		Sama_1509	0.27	+1.1
1,832,825	-		Sama_1509	0.27	-0.5
1,832,825	-		Sama_1509	0.27	-0.1
1,832,825	-		Sama_1509	0.27	+0.4
1,832,825	-		Sama_1509	0.27	+1.5
1,832,828	+		Sama_1509	0.27	+1.5
1,832,828	+		Sama_1509	0.27	+0.5
1,832,828	+		Sama_1509	0.27	-0.8
1,832,829	-		Sama_1509	0.27	-1.1
1,832,829	-		Sama_1509	0.27	+0.4
1,832,829	-		Sama_1509	0.27	-0.0
1,832,934	+		Sama_1509	0.36	+0.2
1,832,935	-		Sama_1509	0.36	+0.3
1,832,935	-		Sama_1509	0.36	-2.0
1,833,210	+		Sama_1509	0.61	+0.3
1,833,231	+		Sama_1509	0.63	+0.8
1,833,231	+		Sama_1509	0.63	-0.4
1,833,231	+		Sama_1509	0.63	-0.7
1,833,231	+		Sama_1509	0.63	-0.6
1,833,231	+		Sama_1509	0.63	-1.1
1,833,231	+		Sama_1509	0.63	+0.5
1,833,231	+		Sama_1509	0.63	+0.2
1,833,231	+		Sama_1509	0.63	-0.8
1,833,231	+		Sama_1509	0.63	-0.1
1,833,232	-		Sama_1509	0.63	+1.1
1,833,232	-		Sama_1509	0.63	+0.7
1,833,232	-		Sama_1509	0.63	+2.1
1,833,232	-		Sama_1509	0.63	+0.2
1,833,233	+		Sama_1509	0.63	-0.5
1,833,233	+		Sama_1509	0.63	-0.2
1,833,234	-		Sama_1509	0.63	+1.0
1,833,234	-		Sama_1509	0.63	+1.8
1,833,234	-		Sama_1509	0.63	-1.8
1,833,304	+		Sama_1509	0.69	-0.0