Experiment: defined media with 30 mM sodium lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3458 and Dsui_3459 are separated by 46 nucleotides Dsui_3459 and Dsui_3460 are separated by 1 nucleotides Dsui_3460 and Dsui_3461 are separated by 150 nucleotides
Dsui_3458: Dsui_3458 - septum site-determining protein MinC, at 3,721,228 to 3,722,064
_3458
Dsui_3459: Dsui_3459 - septum site-determining protein MinD, at 3,722,111 to 3,722,923
_3459
Dsui_3460: Dsui_3460 - cell division topological specificity factor MinE, at 3,722,925 to 3,723,191
_3460
Dsui_3461: Dsui_3461 - hypothetical protein, at 3,723,342 to 3,724,892
_3461
Position (kb)
3722
3723 Strain fitness (log2 ratio)
-1
0
1
2 at 3721.173 kb on + strand at 3721.181 kb on - strand at 3721.233 kb on - strand at 3721.502 kb on - strand, within Dsui_3458 at 3721.636 kb on + strand, within Dsui_3458 at 3721.770 kb on + strand, within Dsui_3458 at 3721.827 kb on + strand, within Dsui_3458 at 3721.874 kb on - strand at 3721.967 kb on + strand, within Dsui_3458 at 3722.050 kb on + strand at 3722.057 kb on - strand at 3722.057 kb on - strand at 3722.083 kb on + strand at 3722.083 kb on + strand at 3722.083 kb on + strand at 3722.083 kb on + strand at 3722.091 kb on - strand at 3722.091 kb on - strand at 3722.184 kb on + strand at 3722.186 kb on - strand at 3722.192 kb on - strand at 3722.241 kb on + strand, within Dsui_3459 at 3722.241 kb on + strand, within Dsui_3459 at 3722.249 kb on - strand at 3722.346 kb on + strand, within Dsui_3459 at 3722.444 kb on + strand, within Dsui_3459 at 3722.590 kb on + strand, within Dsui_3459 at 3722.649 kb on + strand, within Dsui_3459 at 3722.649 kb on - strand at 3722.691 kb on + strand, within Dsui_3459 at 3722.766 kb on + strand, within Dsui_3459 at 3722.861 kb on + strand at 3723.247 kb on + strand at 3723.459 kb on - strand at 3723.759 kb on + strand at 3723.831 kb on + strand, within Dsui_3461 at 3723.884 kb on + strand, within Dsui_3461 at 3723.908 kb on + strand at 3723.913 kb on + strand at 3723.921 kb on - strand, within Dsui_3461
Per-strain Table
Position Strand Gene LocusTag Fraction defined media with 30 mM sodium lactate remove 3,721,173 + +0.5 3,721,181 - -1.0 3,721,233 - -0.8 3,721,502 - Dsui_3458 0.33 +0.4 3,721,636 + Dsui_3458 0.49 -0.1 3,721,770 + Dsui_3458 0.65 +0.2 3,721,827 + Dsui_3458 0.72 +0.1 3,721,874 - +1.1 3,721,967 + Dsui_3458 0.88 +1.1 3,722,050 + +0.4 3,722,057 - -1.5 3,722,057 - +1.7 3,722,083 + -0.1 3,722,083 + +0.2 3,722,083 + -0.7 3,722,083 + +0.5 3,722,091 - +2.1 3,722,091 - -0.2 3,722,184 + +0.5 3,722,186 - +0.5 3,722,192 - +1.1 3,722,241 + Dsui_3459 0.16 +0.0 3,722,241 + Dsui_3459 0.16 -0.7 3,722,249 - +2.1 3,722,346 + Dsui_3459 0.29 +0.5 3,722,444 + Dsui_3459 0.41 +0.2 3,722,590 + Dsui_3459 0.59 +1.1 3,722,649 + Dsui_3459 0.66 -1.2 3,722,649 - +1.5 3,722,691 + Dsui_3459 0.71 +1.1 3,722,766 + Dsui_3459 0.81 +0.4 3,722,861 + -0.9 3,723,247 + +1.8 3,723,459 - +0.1 3,723,759 + +1.5 3,723,831 + Dsui_3461 0.32 +1.1 3,723,884 + Dsui_3461 0.35 +0.5 3,723,908 + +2.1 3,723,913 + +2.1 3,723,921 - Dsui_3461 0.37 -0.9
Or see this region's nucleotide sequence