Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2805
Experiment: MoYLS4 with Spectinomycin 0.0125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Spectinomycin 0.0125 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,546,993 | + | DvMF_2804 | 0.39 | -0.6 | |
3,547,021 | - | DvMF_2804 | 0.41 | +0.7 | |
3,547,492 | + | DvMF_2804 | 0.74 | -0.5 | |
3,547,492 | + | DvMF_2804 | 0.74 | -0.3 | |
3,547,500 | - | DvMF_2804 | 0.75 | -0.1 | |
3,547,663 | - | DvMF_2804 | 0.86 | -0.7 | |
3,548,119 | - | DvMF_2805 | 0.12 | -0.2 | |
3,548,125 | - | DvMF_2805 | 0.12 | +0.1 | |
3,548,133 | - | DvMF_2805 | 0.13 | +0.2 | |
3,548,187 | + | DvMF_2805 | 0.18 | -0.1 | |
3,548,192 | + | DvMF_2805 | 0.19 | -0.3 | |
3,548,559 | - | DvMF_2805 | 0.52 | -0.3 | |
3,548,791 | + | DvMF_2805 | 0.73 | -0.1 | |
3,548,899 | + | DvMF_2805 | 0.83 | -0.2 | |
3,548,907 | - | DvMF_2805 | 0.84 | -0.1 | |
3,549,373 | - | DvMF_2806 | 0.20 | -0.2 | |
3,549,460 | - | DvMF_2806 | 0.36 | -0.1 | |
3,549,609 | + | DvMF_2806 | 0.63 | -0.1 | |
3,549,758 | - | DvMF_2806 | 0.89 | +0.2 | |
3,549,781 | - | -1.3 | |||
3,549,873 | + | -0.4 | |||
3,549,873 | + | -0.1 | |||
3,550,032 | + | DvMF_2807 | 0.14 | -1.3 |
Or see this region's nucleotide sequence