Experiment: MoYLS4 with Spectinomycin 0.0125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0724 and DvMF_0725 overlap by 4 nucleotides DvMF_0725 and DvMF_0726 are separated by 13 nucleotides DvMF_0726 and DvMF_0727 are separated by 1 nucleotides DvMF_0727 and DvMF_0728 overlap by 4 nucleotides
DvMF_0724: DvMF_0724 - hypothetical protein (RefSeq), at 874,000 to 874,695
_0724
DvMF_0725: DvMF_0725 - hypothetical protein (RefSeq), at 874,692 to 874,958
_0725
DvMF_0726: DvMF_0726 - hypothetical protein (RefSeq), at 874,972 to 875,187
_0726
DvMF_0727: DvMF_0727 - Protein of unknown function DUF1804 (RefSeq), at 875,189 to 875,695
_0727
DvMF_0728: DvMF_0728 - phage uncharacterized protein (RefSeq), at 875,692 to 877,368
_0728
Position (kb) 875
876 Strain fitness (log2 ratio) -2
-1
0
1 at 874.333 kb on + strand, within DvMF_0724 at 874.391 kb on - strand, within DvMF_0724 at 874.640 kb on + strand at 874.659 kb on + strand at 874.738 kb on - strand, within DvMF_0725 at 874.761 kb on + strand, within DvMF_0725 at 875.181 kb on - strand at 875.183 kb on - strand at 875.207 kb on + strand at 875.236 kb on - strand at 875.314 kb on + strand, within DvMF_0727 at 875.422 kb on + strand, within DvMF_0727 at 875.422 kb on + strand, within DvMF_0727 at 875.972 kb on + strand, within DvMF_0728 at 876.052 kb on - strand, within DvMF_0728 at 876.144 kb on - strand, within DvMF_0728 at 876.157 kb on + strand, within DvMF_0728 at 876.288 kb on - strand, within DvMF_0728 at 876.385 kb on + strand, within DvMF_0728 at 876.516 kb on + strand, within DvMF_0728
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Spectinomycin 0.0125 mg/ml remove 874,333 + DvMF_0724 0.48 -0.3 874,391 - DvMF_0724 0.56 -0.4 874,640 + -0.3 874,659 + -0.3 874,738 - DvMF_0725 0.17 -1.8 874,761 + DvMF_0725 0.26 -0.2 875,181 - -0.4 875,183 - -0.9 875,207 + -0.4 875,236 - -0.3 875,314 + DvMF_0727 0.25 -0.7 875,422 + DvMF_0727 0.46 -0.9 875,422 + DvMF_0727 0.46 -1.1 875,972 + DvMF_0728 0.17 -0.7 876,052 - DvMF_0728 0.21 -0.4 876,144 - DvMF_0728 0.27 +0.2 876,157 + DvMF_0728 0.28 -0.5 876,288 - DvMF_0728 0.36 -0.3 876,385 + DvMF_0728 0.41 -0.3 876,516 + DvMF_0728 0.49 -0.4
Or see this region's nucleotide sequence