Experiment: MoYLS4 with Spectinomycin 0.0125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0629 and DvMF_0630 overlap by 14 nucleotides DvMF_0630 and DvMF_0631 overlap by 4 nucleotides DvMF_0631 and DvMF_0632 are separated by 446 nucleotides DvMF_0632 and DvMF_0633 are separated by 146 nucleotides
DvMF_0629: DvMF_0629 - protein of unknown function DUF214 (RefSeq), at 751,411 to 752,562
_0629
DvMF_0630: DvMF_0630 - ABC transporter related (RefSeq), at 752,549 to 753,355
_0630
DvMF_0631: DvMF_0631 - efflux transporter, RND family, MFP subunit (RefSeq), at 753,352 to 754,650
_0631
DvMF_0632: DvMF_0632 - hypothetical protein (RefSeq), at 755,097 to 755,330
_0632
DvMF_0633: DvMF_0633 - Phosphoglycerate mutase (RefSeq), at 755,477 to 756,460
_0633
Position (kb) 753
754
755 Strain fitness (log2 ratio) -1
0
1 at 752.491 kb on + strand at 752.628 kb on - strand at 752.808 kb on + strand, within DvMF_0630 at 752.816 kb on - strand, within DvMF_0630 at 752.851 kb on - strand, within DvMF_0630 at 752.933 kb on - strand, within DvMF_0630 at 753.005 kb on + strand, within DvMF_0630 at 753.074 kb on - strand, within DvMF_0630 at 753.188 kb on + strand, within DvMF_0630 at 753.486 kb on + strand, within DvMF_0631 at 753.654 kb on + strand, within DvMF_0631 at 753.894 kb on + strand, within DvMF_0631 at 754.075 kb on + strand, within DvMF_0631 at 754.210 kb on + strand, within DvMF_0631 at 754.276 kb on + strand, within DvMF_0631 at 754.389 kb on + strand, within DvMF_0631 at 754.430 kb on + strand, within DvMF_0631 at 754.563 kb on - strand at 754.737 kb on + strand at 755.021 kb on + strand at 755.088 kb on + strand at 755.089 kb on - strand at 755.350 kb on + strand at 755.391 kb on - strand at 755.596 kb on + strand, within DvMF_0633 at 755.625 kb on - strand, within DvMF_0633
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Spectinomycin 0.0125 mg/ml remove 752,491 + +0.2 752,628 - -0.5 752,808 + DvMF_0630 0.32 -0.1 752,816 - DvMF_0630 0.33 -0.5 752,851 - DvMF_0630 0.37 -0.6 752,933 - DvMF_0630 0.48 -0.2 753,005 + DvMF_0630 0.57 -0.0 753,074 - DvMF_0630 0.65 -0.3 753,188 + DvMF_0630 0.79 -0.3 753,486 + DvMF_0631 0.10 -0.2 753,654 + DvMF_0631 0.23 -1.3 753,894 + DvMF_0631 0.42 -0.2 754,075 + DvMF_0631 0.56 -0.0 754,210 + DvMF_0631 0.66 -0.2 754,276 + DvMF_0631 0.71 -0.2 754,389 + DvMF_0631 0.80 -0.4 754,430 + DvMF_0631 0.83 -1.0 754,563 - -0.6 754,737 + -0.2 755,021 + -0.5 755,088 + -0.2 755,089 - -0.2 755,350 + +0.0 755,391 - -0.2 755,596 + DvMF_0633 0.12 -0.1 755,625 - DvMF_0633 0.15 +0.3
Or see this region's nucleotide sequence