Experiment: L-Proline as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_4120 and HP15_4121 are separated by 323 nucleotides HP15_4121 and HP15_4122 are separated by 109 nucleotides HP15_4122 and HP15_4123 overlap by 1 nucleotides
HP15_4120: HP15_4120 - secreted protein containing molybdopterin oxidoreductase / molybdopterin dinucleotide-binding region, at 4,354,441 to 4,357,326
_4120
HP15_4121: HP15_4121 - cytoplasmic chaperone TorD family protein, at 4,357,650 to 4,358,261
_4121
HP15_4122: HP15_4122 - conserved hypothetical protein, at 4,358,371 to 4,358,997
_4122
HP15_4123: HP15_4123 - molybdopterin-guanine dinucleotide biosynthesis protein A, at 4,358,997 to 4,359,587
_4123
Position (kb)
4357
4358
4359 Strain fitness (log2 ratio)
-1
0
1
2 at 4356.711 kb on - strand, within HP15_4120 at 4356.726 kb on - strand, within HP15_4120 at 4356.761 kb on - strand, within HP15_4120 at 4356.805 kb on - strand, within HP15_4120 at 4356.827 kb on - strand, within HP15_4120 at 4356.902 kb on + strand, within HP15_4120 at 4357.033 kb on + strand, within HP15_4120 at 4357.074 kb on - strand at 4357.074 kb on - strand at 4357.095 kb on + strand at 4357.095 kb on + strand at 4357.103 kb on - strand at 4357.223 kb on - strand at 4357.234 kb on - strand at 4357.242 kb on + strand at 4357.243 kb on + strand at 4357.257 kb on - strand at 4357.304 kb on + strand at 4357.385 kb on - strand at 4357.385 kb on - strand at 4357.412 kb on - strand at 4357.440 kb on + strand at 4357.460 kb on - strand at 4357.485 kb on + strand at 4357.493 kb on - strand at 4357.637 kb on - strand at 4357.865 kb on + strand, within HP15_4121 at 4357.992 kb on + strand, within HP15_4121 at 4358.057 kb on + strand, within HP15_4121 at 4358.426 kb on - strand at 4358.436 kb on - strand, within HP15_4122 at 4358.490 kb on + strand, within HP15_4122 at 4358.490 kb on + strand, within HP15_4122 at 4358.498 kb on - strand, within HP15_4122 at 4358.533 kb on - strand, within HP15_4122 at 4358.630 kb on - strand, within HP15_4122 at 4358.630 kb on - strand, within HP15_4122 at 4358.678 kb on - strand, within HP15_4122 at 4358.680 kb on - strand, within HP15_4122 at 4358.699 kb on - strand, within HP15_4122 at 4358.748 kb on - strand, within HP15_4122 at 4358.748 kb on - strand, within HP15_4122 at 4358.806 kb on - strand, within HP15_4122 at 4358.875 kb on - strand, within HP15_4122 at 4358.925 kb on - strand, within HP15_4122 at 4358.925 kb on - strand, within HP15_4122 at 4358.951 kb on + strand at 4359.158 kb on + strand, within HP15_4123 at 4359.225 kb on - strand, within HP15_4123
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline as (N) remove 4,356,711 - HP15_4120 0.79 +1.2 4,356,726 - HP15_4120 0.79 -1.3 4,356,761 - HP15_4120 0.80 +1.4 4,356,805 - HP15_4120 0.82 +1.0 4,356,827 - HP15_4120 0.83 +0.5 4,356,902 + HP15_4120 0.85 -0.6 4,357,033 + HP15_4120 0.90 -0.1 4,357,074 - +0.0 4,357,074 - -0.3 4,357,095 + -0.1 4,357,095 + -0.3 4,357,103 - -0.2 4,357,223 - +1.3 4,357,234 - -0.4 4,357,242 + +0.7 4,357,243 + -0.4 4,357,257 - -0.4 4,357,304 + +0.5 4,357,385 - +0.1 4,357,385 - -0.1 4,357,412 - -0.1 4,357,440 + -0.2 4,357,460 - -0.7 4,357,485 + +1.5 4,357,493 - +0.5 4,357,637 - +0.8 4,357,865 + HP15_4121 0.35 +2.2 4,357,992 + HP15_4121 0.56 -0.0 4,358,057 + HP15_4121 0.67 +0.8 4,358,426 - -0.5 4,358,436 - HP15_4122 0.10 +0.1 4,358,490 + HP15_4122 0.19 +0.1 4,358,490 + HP15_4122 0.19 +1.2 4,358,498 - HP15_4122 0.20 +0.9 4,358,533 - HP15_4122 0.26 +1.3 4,358,630 - HP15_4122 0.41 -0.1 4,358,630 - HP15_4122 0.41 +1.1 4,358,678 - HP15_4122 0.49 +1.2 4,358,680 - HP15_4122 0.49 +1.4 4,358,699 - HP15_4122 0.52 +1.4 4,358,748 - HP15_4122 0.60 -0.3 4,358,748 - HP15_4122 0.60 -0.1 4,358,806 - HP15_4122 0.69 +0.1 4,358,875 - HP15_4122 0.80 -0.3 4,358,925 - HP15_4122 0.88 +1.4 4,358,925 - HP15_4122 0.88 +0.0 4,358,951 + +0.0 4,359,158 + HP15_4123 0.27 +0.7 4,359,225 - HP15_4123 0.39 -0.2
Or see this region's nucleotide sequence