Strain Fitness in Marinobacter adhaerens HP15 around HP15_3289

Experiment: L-Proline as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3288 and HP15_3289 are separated by 16 nucleotidesHP15_3289 and HP15_3290 are separated by 11 nucleotides HP15_3288: HP15_3288 - anthranilate synthase component I, at 3,446,043 to 3,447,584 _3288 HP15_3289: HP15_3289 - para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II, at 3,447,601 to 3,448,182 _3289 HP15_3290: HP15_3290 - anthranilate phosphoribosyltransferase, at 3,448,194 to 3,449,222 _3290 Position (kb) 3447 3448 3449Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 3446.904 kb on - strand, within HP15_3288at 3447.051 kb on + strand, within HP15_3288at 3447.262 kb on + strand, within HP15_3288at 3447.345 kb on - strand, within HP15_3288at 3447.433 kb on - strandat 3447.462 kb on + strandat 3447.651 kb on + strandat 3447.668 kb on + strand, within HP15_3289at 3447.714 kb on + strand, within HP15_3289at 3447.749 kb on + strand, within HP15_3289at 3447.749 kb on + strand, within HP15_3289at 3447.902 kb on - strand, within HP15_3289at 3448.009 kb on - strand, within HP15_3289at 3448.017 kb on - strand, within HP15_3289at 3448.019 kb on - strand, within HP15_3289at 3448.027 kb on - strand, within HP15_3289at 3448.027 kb on - strand, within HP15_3289at 3448.098 kb on + strand, within HP15_3289at 3448.108 kb on + strand, within HP15_3289at 3448.163 kb on - strandat 3448.217 kb on - strandat 3448.270 kb on + strandat 3448.289 kb on + strandat 3448.405 kb on - strand, within HP15_3290at 3448.450 kb on + strand, within HP15_3290at 3448.706 kb on - strand, within HP15_3290at 3448.788 kb on + strand, within HP15_3290at 3448.891 kb on - strand, within HP15_3290at 3449.016 kb on - strand, within HP15_3290

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline as (N)
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3,446,904 - HP15_3288 0.56 -3.5
3,447,051 + HP15_3288 0.65 -1.9
3,447,262 + HP15_3288 0.79 -2.1
3,447,345 - HP15_3288 0.84 -1.9
3,447,433 - -2.7
3,447,462 + -0.3
3,447,651 + -2.4
3,447,668 + HP15_3289 0.12 -2.5
3,447,714 + HP15_3289 0.19 -3.8
3,447,749 + HP15_3289 0.25 -4.0
3,447,749 + HP15_3289 0.25 -2.5
3,447,902 - HP15_3289 0.52 -2.5
3,448,009 - HP15_3289 0.70 -3.7
3,448,017 - HP15_3289 0.71 -2.9
3,448,019 - HP15_3289 0.72 -2.2
3,448,027 - HP15_3289 0.73 -4.3
3,448,027 - HP15_3289 0.73 -1.5
3,448,098 + HP15_3289 0.85 -3.1
3,448,108 + HP15_3289 0.87 -2.6
3,448,163 - -2.8
3,448,217 - +0.1
3,448,270 + -1.5
3,448,289 + +0.7
3,448,405 - HP15_3290 0.21 -1.9
3,448,450 + HP15_3290 0.25 +0.2
3,448,706 - HP15_3290 0.50 -2.3
3,448,788 + HP15_3290 0.58 -1.1
3,448,891 - HP15_3290 0.68 -0.9
3,449,016 - HP15_3290 0.80 -1.8

Or see this region's nucleotide sequence