Strain Fitness in Marinobacter adhaerens HP15 around HP15_2386

Experiment: L-Proline as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2385 and HP15_2386 are separated by 28 nucleotidesHP15_2386 and HP15_2387 are separated by 8 nucleotidesHP15_2387 and HP15_2388 are separated by 1 nucleotides HP15_2385: HP15_2385 - UDP-glucose 6-dehydrogenase, at 2,515,051 to 2,516,223 _2385 HP15_2386: HP15_2386 - UDP-glucose 4-epimerase, at 2,516,252 to 2,517,208 _2386 HP15_2387: HP15_2387 - dTDP-glucose 4-6-dehydratase, at 2,517,217 to 2,518,164 _2387 HP15_2388: HP15_2388 - glycosyl transferase-like protein, at 2,518,166 to 2,518,474 _2388 Position (kb) 2516 2517 2518Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 2515.317 kb on + strand, within HP15_2385at 2515.416 kb on + strand, within HP15_2385at 2515.456 kb on - strand, within HP15_2385at 2515.529 kb on + strand, within HP15_2385at 2515.571 kb on + strand, within HP15_2385at 2515.571 kb on + strand, within HP15_2385at 2515.670 kb on - strand, within HP15_2385at 2515.746 kb on + strand, within HP15_2385at 2515.755 kb on - strand, within HP15_2385at 2515.756 kb on + strand, within HP15_2385at 2515.773 kb on + strand, within HP15_2385at 2515.775 kb on + strand, within HP15_2385at 2515.832 kb on + strand, within HP15_2385at 2515.832 kb on + strand, within HP15_2385at 2515.832 kb on + strand, within HP15_2385at 2515.832 kb on + strandat 2515.832 kb on + strand, within HP15_2385at 2515.840 kb on - strand, within HP15_2385at 2515.916 kb on - strand, within HP15_2385at 2515.924 kb on + strand, within HP15_2385at 2516.001 kb on - strand, within HP15_2385at 2516.051 kb on - strand, within HP15_2385at 2516.180 kb on + strandat 2516.195 kb on + strandat 2516.402 kb on + strand, within HP15_2386at 2516.402 kb on + strand, within HP15_2386at 2516.402 kb on + strand, within HP15_2386at 2516.410 kb on - strand, within HP15_2386at 2516.460 kb on + strand, within HP15_2386at 2516.461 kb on + strand, within HP15_2386at 2516.493 kb on + strand, within HP15_2386at 2516.510 kb on - strand, within HP15_2386at 2516.605 kb on + strand, within HP15_2386at 2516.613 kb on - strand, within HP15_2386at 2516.619 kb on + strand, within HP15_2386at 2516.736 kb on - strand, within HP15_2386at 2516.761 kb on + strand, within HP15_2386at 2516.793 kb on - strand, within HP15_2386at 2516.839 kb on - strand, within HP15_2386at 2516.891 kb on + strand, within HP15_2386at 2517.067 kb on + strand, within HP15_2386at 2517.081 kb on + strand, within HP15_2386at 2517.082 kb on - strand, within HP15_2386at 2517.157 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline as (N)
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2,515,317 + HP15_2385 0.23 -0.5
2,515,416 + HP15_2385 0.31 +0.9
2,515,456 - HP15_2385 0.35 +1.1
2,515,529 + HP15_2385 0.41 +0.7
2,515,571 + HP15_2385 0.44 -0.4
2,515,571 + HP15_2385 0.44 +1.1
2,515,670 - HP15_2385 0.53 +1.0
2,515,746 + HP15_2385 0.59 +0.9
2,515,755 - HP15_2385 0.60 -0.6
2,515,756 + HP15_2385 0.60 +0.4
2,515,773 + HP15_2385 0.62 -0.8
2,515,775 + HP15_2385 0.62 -0.9
2,515,832 + HP15_2385 0.67 +0.0
2,515,832 + HP15_2385 0.67 -0.1
2,515,832 + HP15_2385 0.67 +1.0
2,515,832 + +0.4
2,515,832 + HP15_2385 0.67 -0.0
2,515,840 - HP15_2385 0.67 -0.3
2,515,916 - HP15_2385 0.74 -0.8
2,515,924 + HP15_2385 0.74 -1.2
2,516,001 - HP15_2385 0.81 +1.0
2,516,051 - HP15_2385 0.85 +1.5
2,516,180 + -0.7
2,516,195 + +1.5
2,516,402 + HP15_2386 0.16 -2.0
2,516,402 + HP15_2386 0.16 -1.4
2,516,402 + HP15_2386 0.16 -1.2
2,516,410 - HP15_2386 0.17 -2.2
2,516,460 + HP15_2386 0.22 -0.6
2,516,461 + HP15_2386 0.22 -2.5
2,516,493 + HP15_2386 0.25 -2.5
2,516,510 - HP15_2386 0.27 -4.1
2,516,605 + HP15_2386 0.37 -0.4
2,516,613 - HP15_2386 0.38 -1.2
2,516,619 + HP15_2386 0.38 -2.3
2,516,736 - HP15_2386 0.51 -2.5
2,516,761 + HP15_2386 0.53 -1.3
2,516,793 - HP15_2386 0.57 -3.0
2,516,839 - HP15_2386 0.61 -0.9
2,516,891 + HP15_2386 0.67 -1.2
2,517,067 + HP15_2386 0.85 +0.3
2,517,081 + HP15_2386 0.87 -2.8
2,517,082 - HP15_2386 0.87 -0.4
2,517,157 + -1.9

Or see this region's nucleotide sequence