Experiment: L-Proline as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2366 and HP15_2367 overlap by 4 nucleotides HP15_2367 and HP15_2368 are separated by 150 nucleotides HP15_2368 and HP15_2369 are separated by 36 nucleotides
HP15_2366: HP15_2366 - transcriptional regulator, AraC family protein, at 2,491,363 to 2,492,388
_2366
HP15_2367: HP15_2367 - argininosuccinate synthase, at 2,492,385 to 2,493,611
_2367
HP15_2368: HP15_2368 - flagellar protein FliS, at 2,493,762 to 2,494,160
_2368
HP15_2369: HP15_2369 - flagellar hook-associated 2 domain protein, at 2,494,197 to 2,496,185
_2369
Position (kb)
2492
2493
2494 Strain fitness (log2 ratio)
-2
-1
0
1 at 2491.476 kb on - strand, within HP15_2366 at 2491.508 kb on - strand, within HP15_2366 at 2491.605 kb on - strand, within HP15_2366 at 2491.624 kb on + strand, within HP15_2366 at 2491.634 kb on + strand, within HP15_2366 at 2491.669 kb on - strand, within HP15_2366 at 2491.833 kb on + strand, within HP15_2366 at 2491.979 kb on + strand, within HP15_2366 at 2492.027 kb on + strand, within HP15_2366 at 2492.041 kb on - strand, within HP15_2366 at 2492.178 kb on - strand, within HP15_2366 at 2492.291 kb on + strand at 2492.291 kb on + strand at 2492.291 kb on + strand at 2492.299 kb on - strand at 2492.380 kb on - strand at 2493.600 kb on - strand at 2493.693 kb on - strand at 2493.726 kb on + strand at 2493.726 kb on + strand at 2493.831 kb on - strand, within HP15_2368 at 2493.835 kb on + strand, within HP15_2368 at 2493.934 kb on + strand, within HP15_2368 at 2494.029 kb on - strand, within HP15_2368 at 2494.041 kb on - strand, within HP15_2368 at 2494.069 kb on + strand, within HP15_2368 at 2494.080 kb on - strand, within HP15_2368 at 2494.146 kb on - strand at 2494.153 kb on - strand at 2494.212 kb on + strand at 2494.254 kb on - strand at 2494.259 kb on - strand at 2494.379 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline as (N) remove 2,491,476 - HP15_2366 0.11 +0.6 2,491,508 - HP15_2366 0.14 +0.9 2,491,605 - HP15_2366 0.24 +1.4 2,491,624 + HP15_2366 0.25 -0.5 2,491,634 + HP15_2366 0.26 -0.1 2,491,669 - HP15_2366 0.30 -0.0 2,491,833 + HP15_2366 0.46 -0.2 2,491,979 + HP15_2366 0.60 -0.0 2,492,027 + HP15_2366 0.65 -0.7 2,492,041 - HP15_2366 0.66 +1.1 2,492,178 - HP15_2366 0.79 -0.5 2,492,291 + -0.7 2,492,291 + -0.2 2,492,291 + +0.1 2,492,299 - +0.4 2,492,380 - +0.1 2,493,600 - -1.9 2,493,693 - +1.0 2,493,726 + -0.8 2,493,726 + +1.6 2,493,831 - HP15_2368 0.17 +1.4 2,493,835 + HP15_2368 0.18 +1.0 2,493,934 + HP15_2368 0.43 +1.2 2,494,029 - HP15_2368 0.67 +1.2 2,494,041 - HP15_2368 0.70 +0.7 2,494,069 + HP15_2368 0.77 +1.1 2,494,080 - HP15_2368 0.80 +1.0 2,494,146 - +0.9 2,494,153 - +1.4 2,494,212 + +0.8 2,494,254 - +1.0 2,494,259 - +1.0 2,494,379 + +1.1
Or see this region's nucleotide sequence