Strain Fitness in Marinobacter adhaerens HP15 around HP15_2367

Experiment: L-Proline as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2366 and HP15_2367 overlap by 4 nucleotidesHP15_2367 and HP15_2368 are separated by 150 nucleotidesHP15_2368 and HP15_2369 are separated by 36 nucleotides HP15_2366: HP15_2366 - transcriptional regulator, AraC family protein, at 2,491,363 to 2,492,388 _2366 HP15_2367: HP15_2367 - argininosuccinate synthase, at 2,492,385 to 2,493,611 _2367 HP15_2368: HP15_2368 - flagellar protein FliS, at 2,493,762 to 2,494,160 _2368 HP15_2369: HP15_2369 - flagellar hook-associated 2 domain protein, at 2,494,197 to 2,496,185 _2369 Position (kb) 2492 2493 2494Strain fitness (log2 ratio) -2 -1 0 1at 2491.476 kb on - strand, within HP15_2366at 2491.508 kb on - strand, within HP15_2366at 2491.605 kb on - strand, within HP15_2366at 2491.624 kb on + strand, within HP15_2366at 2491.634 kb on + strand, within HP15_2366at 2491.669 kb on - strand, within HP15_2366at 2491.833 kb on + strand, within HP15_2366at 2491.979 kb on + strand, within HP15_2366at 2492.027 kb on + strand, within HP15_2366at 2492.041 kb on - strand, within HP15_2366at 2492.178 kb on - strand, within HP15_2366at 2492.291 kb on + strandat 2492.291 kb on + strandat 2492.291 kb on + strandat 2492.299 kb on - strandat 2492.380 kb on - strandat 2493.600 kb on - strandat 2493.693 kb on - strandat 2493.726 kb on + strandat 2493.726 kb on + strandat 2493.831 kb on - strand, within HP15_2368at 2493.835 kb on + strand, within HP15_2368at 2493.934 kb on + strand, within HP15_2368at 2494.029 kb on - strand, within HP15_2368at 2494.041 kb on - strand, within HP15_2368at 2494.069 kb on + strand, within HP15_2368at 2494.080 kb on - strand, within HP15_2368at 2494.146 kb on - strandat 2494.153 kb on - strandat 2494.212 kb on + strandat 2494.254 kb on - strandat 2494.259 kb on - strandat 2494.379 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline as (N)
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2,491,476 - HP15_2366 0.11 +0.6
2,491,508 - HP15_2366 0.14 +0.9
2,491,605 - HP15_2366 0.24 +1.4
2,491,624 + HP15_2366 0.25 -0.5
2,491,634 + HP15_2366 0.26 -0.1
2,491,669 - HP15_2366 0.30 -0.0
2,491,833 + HP15_2366 0.46 -0.2
2,491,979 + HP15_2366 0.60 -0.0
2,492,027 + HP15_2366 0.65 -0.7
2,492,041 - HP15_2366 0.66 +1.1
2,492,178 - HP15_2366 0.79 -0.5
2,492,291 + -0.7
2,492,291 + -0.2
2,492,291 + +0.1
2,492,299 - +0.4
2,492,380 - +0.1
2,493,600 - -1.9
2,493,693 - +1.0
2,493,726 + -0.8
2,493,726 + +1.6
2,493,831 - HP15_2368 0.17 +1.4
2,493,835 + HP15_2368 0.18 +1.0
2,493,934 + HP15_2368 0.43 +1.2
2,494,029 - HP15_2368 0.67 +1.2
2,494,041 - HP15_2368 0.70 +0.7
2,494,069 + HP15_2368 0.77 +1.1
2,494,080 - HP15_2368 0.80 +1.0
2,494,146 - +0.9
2,494,153 - +1.4
2,494,212 + +0.8
2,494,254 - +1.0
2,494,259 - +1.0
2,494,379 + +1.1

Or see this region's nucleotide sequence