Experiment: defined media with 30 mM sodium lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2641 and Dsui_2642 are separated by 13 nucleotides Dsui_2642 and Dsui_2643 are separated by 14 nucleotides Dsui_2643 and Dsui_2644 are separated by 179 nucleotides
Dsui_2641: Dsui_2641 - putative multicopper oxidase, at 2,792,760 to 2,794,169
_2641
Dsui_2642: Dsui_2642 - outer membrane protein, at 2,794,183 to 2,795,605
_2642
Dsui_2643: Dsui_2643 - hypothetical protein, at 2,795,620 to 2,795,895
_2643
Dsui_2644: Dsui_2644 - heavy metal response regulator, at 2,796,075 to 2,796,752
_2644
Position (kb)
2794
2795
2796 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2793.473 kb on + strand, within Dsui_2641 at 2793.490 kb on + strand, within Dsui_2641 at 2793.497 kb on + strand, within Dsui_2641 at 2793.497 kb on + strand, within Dsui_2641 at 2793.505 kb on - strand, within Dsui_2641 at 2793.539 kb on + strand, within Dsui_2641 at 2793.888 kb on - strand, within Dsui_2641 at 2793.888 kb on - strand, within Dsui_2641 at 2793.987 kb on - strand, within Dsui_2641 at 2794.433 kb on + strand, within Dsui_2642 at 2794.553 kb on + strand at 2794.563 kb on + strand, within Dsui_2642 at 2794.563 kb on + strand, within Dsui_2642 at 2794.699 kb on - strand, within Dsui_2642 at 2794.774 kb on - strand, within Dsui_2642 at 2794.878 kb on - strand, within Dsui_2642 at 2794.902 kb on + strand, within Dsui_2642 at 2794.910 kb on - strand, within Dsui_2642 at 2795.012 kb on - strand, within Dsui_2642 at 2795.257 kb on - strand, within Dsui_2642 at 2795.393 kb on - strand, within Dsui_2642 at 2795.412 kb on - strand at 2795.618 kb on + strand at 2795.626 kb on - strand at 2795.640 kb on + strand at 2795.640 kb on + strand at 2795.797 kb on + strand at 2795.939 kb on - strand at 2795.968 kb on + strand at 2795.977 kb on + strand at 2796.126 kb on - strand at 2796.213 kb on - strand, within Dsui_2644 at 2796.234 kb on - strand at 2796.302 kb on + strand, within Dsui_2644 at 2796.302 kb on + strand, within Dsui_2644 at 2796.379 kb on - strand at 2796.407 kb on + strand, within Dsui_2644 at 2796.601 kb on + strand, within Dsui_2644
Per-strain Table
Position Strand Gene LocusTag Fraction defined media with 30 mM sodium lactate remove 2,793,473 + Dsui_2641 0.51 -1.0 2,793,490 + Dsui_2641 0.52 -0.8 2,793,497 + Dsui_2641 0.52 +0.0 2,793,497 + Dsui_2641 0.52 -0.1 2,793,505 - Dsui_2641 0.53 +1.2 2,793,539 + Dsui_2641 0.55 -0.8 2,793,888 - Dsui_2641 0.80 -2.2 2,793,888 - Dsui_2641 0.80 -1.6 2,793,987 - Dsui_2641 0.87 -0.6 2,794,433 + Dsui_2642 0.18 +0.6 2,794,553 + -0.1 2,794,563 + Dsui_2642 0.27 -1.3 2,794,563 + Dsui_2642 0.27 -1.0 2,794,699 - Dsui_2642 0.36 +0.4 2,794,774 - Dsui_2642 0.42 +0.1 2,794,878 - Dsui_2642 0.49 -0.2 2,794,902 + Dsui_2642 0.51 -0.9 2,794,910 - Dsui_2642 0.51 +0.1 2,795,012 - Dsui_2642 0.58 -1.5 2,795,257 - Dsui_2642 0.75 -0.1 2,795,393 - Dsui_2642 0.85 -0.7 2,795,412 - -0.1 2,795,618 + -0.5 2,795,626 - +0.9 2,795,640 + +1.4 2,795,640 + +2.2 2,795,797 + -0.4 2,795,939 - +0.6 2,795,968 + +0.7 2,795,977 + +0.5 2,796,126 - -1.5 2,796,213 - Dsui_2644 0.20 -1.4 2,796,234 - -0.8 2,796,302 + Dsui_2644 0.33 -1.1 2,796,302 + Dsui_2644 0.33 +0.3 2,796,379 - +0.6 2,796,407 + Dsui_2644 0.49 -1.0 2,796,601 + Dsui_2644 0.78 -0.1
Or see this region's nucleotide sequence