Experiment: defined media with 30 mM sodium lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2381 and Dsui_2382 are separated by 137 nucleotides Dsui_2382 and Dsui_2383 are separated by 87 nucleotides
Dsui_2381: Dsui_2381 - phospho-2-dehydro-3-deoxyheptonate aldolase, at 2,528,965 to 2,530,041
_2381
Dsui_2382: Dsui_2382 - PAS domain S-box, at 2,530,179 to 2,532,755
_2382
Dsui_2383: Dsui_2383 - hypothetical protein, at 2,532,843 to 2,534,117
_2383
Position (kb)
2530
2531
2532
2533 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2530.155 kb on + strand at 2530.155 kb on + strand at 2530.163 kb on - strand at 2530.163 kb on - strand at 2530.163 kb on - strand at 2530.163 kb on - strand at 2530.163 kb on - strand at 2530.163 kb on - strand at 2530.198 kb on + strand at 2530.289 kb on - strand at 2530.471 kb on - strand, within Dsui_2382 at 2530.471 kb on - strand, within Dsui_2382 at 2530.613 kb on + strand at 2530.837 kb on - strand, within Dsui_2382 at 2530.846 kb on - strand, within Dsui_2382 at 2530.934 kb on + strand at 2530.942 kb on - strand at 2531.223 kb on - strand, within Dsui_2382 at 2531.335 kb on - strand, within Dsui_2382 at 2531.356 kb on - strand at 2531.415 kb on + strand at 2531.484 kb on - strand, within Dsui_2382 at 2531.489 kb on - strand at 2531.563 kb on - strand, within Dsui_2382 at 2531.579 kb on - strand, within Dsui_2382 at 2531.579 kb on - strand, within Dsui_2382 at 2531.584 kb on - strand at 2531.779 kb on - strand, within Dsui_2382 at 2531.822 kb on + strand, within Dsui_2382 at 2532.037 kb on - strand, within Dsui_2382 at 2532.083 kb on - strand, within Dsui_2382 at 2532.477 kb on - strand, within Dsui_2382 at 2532.594 kb on - strand at 2532.744 kb on - strand at 2533.261 kb on - strand at 2533.326 kb on + strand, within Dsui_2383 at 2533.331 kb on + strand, within Dsui_2383 at 2533.352 kb on + strand, within Dsui_2383 at 2533.353 kb on + strand, within Dsui_2383 at 2533.372 kb on + strand at 2533.488 kb on + strand, within Dsui_2383 at 2533.488 kb on + strand at 2533.706 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction defined media with 30 mM sodium lactate remove 2,530,155 + -0.3 2,530,155 + +0.5 2,530,163 - +3.1 2,530,163 - +0.1 2,530,163 - -1.1 2,530,163 - -0.4 2,530,163 - -1.9 2,530,163 - +1.1 2,530,198 + +1.1 2,530,289 - -0.3 2,530,471 - Dsui_2382 0.11 -0.5 2,530,471 - Dsui_2382 0.11 -1.1 2,530,613 + +0.1 2,530,837 - Dsui_2382 0.26 -0.1 2,530,846 - Dsui_2382 0.26 +1.6 2,530,934 + +1.5 2,530,942 - +1.1 2,531,223 - Dsui_2382 0.41 -1.2 2,531,335 - Dsui_2382 0.45 -0.3 2,531,356 - +0.1 2,531,415 + +1.6 2,531,484 - Dsui_2382 0.51 -1.3 2,531,489 - +0.5 2,531,563 - Dsui_2382 0.54 +0.8 2,531,579 - Dsui_2382 0.54 -0.4 2,531,579 - Dsui_2382 0.54 -0.4 2,531,584 - +0.5 2,531,779 - Dsui_2382 0.62 -0.1 2,531,822 + Dsui_2382 0.64 -1.1 2,532,037 - Dsui_2382 0.72 -0.5 2,532,083 - Dsui_2382 0.74 -0.6 2,532,477 - Dsui_2382 0.89 -0.1 2,532,594 - -0.8 2,532,744 - +0.2 2,533,261 - +1.6 2,533,326 + Dsui_2383 0.38 +0.6 2,533,331 + Dsui_2383 0.38 -0.8 2,533,352 + Dsui_2383 0.40 -1.8 2,533,353 + Dsui_2383 0.40 +0.5 2,533,372 + +3.5 2,533,488 + Dsui_2383 0.51 -0.1 2,533,488 + +1.1 2,533,706 - +0.7
Or see this region's nucleotide sequence