Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2170
Experiment: MoYLS4 with Spectinomycin 0.0125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Spectinomycin 0.0125 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,706,519 | - | DvMF_2169 | 0.67 | -0.2 | |
2,706,564 | + | DvMF_2169 | 0.69 | -0.2 | |
2,706,582 | - | DvMF_2169 | 0.70 | -0.4 | |
2,706,701 | + | DvMF_2169 | 0.76 | -0.3 | |
2,706,709 | - | DvMF_2169 | 0.76 | -0.2 | |
2,706,709 | - | DvMF_2169 | 0.76 | -0.1 | |
2,706,785 | + | DvMF_2169 | 0.80 | -0.2 | |
2,706,972 | + | DvMF_2169 | 0.89 | -0.3 | |
2,707,064 | - | -0.1 | |||
2,707,259 | - | -0.6 | |||
2,707,259 | - | -0.9 | |||
2,707,259 | - | +0.4 | |||
2,707,379 | - | -0.3 | |||
2,707,482 | + | +0.0 | |||
2,707,611 | + | DvMF_2170 | 0.23 | -0.3 | |
2,707,699 | - | DvMF_2170 | 0.44 | -0.1 | |
2,708,038 | - | +0.1 | |||
2,708,183 | - | -0.2 | |||
2,708,384 | - | -0.3 | |||
2,708,473 | + | +0.0 | |||
2,708,582 | - | -0.4 | |||
2,708,737 | - | -0.8 | |||
2,708,747 | + | +0.0 | |||
2,708,755 | - | -0.8 | |||
2,708,755 | - | +0.1 | |||
2,708,755 | - | -0.7 | |||
2,708,846 | + | +0.2 |
Or see this region's nucleotide sequence