Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0380
Experiment: MoYLS4 with Spectinomycin 0.0125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Spectinomycin 0.0125 mg/ml |
---|---|---|---|---|---|
remove | |||||
446,328 | - | DvMF_0379 | 0.43 | +0.1 | |
446,351 | - | DvMF_0379 | 0.44 | -0.1 | |
446,387 | - | DvMF_0379 | 0.47 | -0.3 | |
446,795 | - | DvMF_0379 | 0.78 | -0.2 | |
446,796 | + | DvMF_0379 | 0.78 | -0.2 | |
447,095 | - | -0.1 | |||
447,190 | + | -0.4 | |||
447,208 | - | -1.3 | |||
447,305 | - | -0.3 | |||
447,359 | + | DvMF_0380 | 0.11 | -0.2 | |
447,432 | + | DvMF_0380 | 0.25 | -0.3 | |
447,440 | - | DvMF_0380 | 0.27 | +0.3 | |
447,440 | - | DvMF_0380 | 0.27 | -0.4 | |
447,440 | - | DvMF_0380 | 0.27 | -0.2 | |
447,440 | - | DvMF_0380 | 0.27 | -0.0 | |
447,440 | - | DvMF_0380 | 0.27 | +0.1 | |
448,041 | - | -0.6 | |||
448,073 | + | -0.5 | |||
448,099 | - | -0.5 | |||
448,129 | - | -0.1 | |||
448,287 | + | -0.5 | |||
448,674 | + | DvMF_0381 | 0.26 | -1.1 | |
448,676 | - | DvMF_0381 | 0.26 | -0.3 |
Or see this region's nucleotide sequence