Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0112
Experiment: MoYLS4 with Spectinomycin 0.0125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Spectinomycin 0.0125 mg/ml |
---|---|---|---|---|---|
remove | |||||
121,199 | + | clpX | DvMF_0111 | 0.62 | -0.5 |
121,982 | + | -1.0 | |||
122,203 | - | DvMF_0112 | 0.13 | -0.2 | |
122,307 | - | DvMF_0112 | 0.17 | -0.6 | |
122,336 | + | DvMF_0112 | 0.18 | -0.3 | |
122,620 | + | DvMF_0112 | 0.29 | -0.5 | |
122,628 | - | DvMF_0112 | 0.30 | -1.8 | |
122,687 | - | DvMF_0112 | 0.32 | -3.0 | |
123,265 | + | DvMF_0112 | 0.56 | -1.0 | |
123,273 | - | DvMF_0112 | 0.56 | -0.7 | |
123,375 | + | DvMF_0112 | 0.60 | -0.0 | |
123,831 | - | DvMF_0112 | 0.79 | +0.2 | |
124,375 | - | -0.2 | |||
124,789 | + | +0.3 | |||
124,854 | + | DvMF_0113 | 0.17 | -1.3 | |
124,869 | - | DvMF_0113 | 0.20 | -0.1 | |
125,031 | + | DvMF_0113 | 0.48 | -0.1 | |
125,032 | + | DvMF_0113 | 0.48 | -0.1 | |
125,035 | - | DvMF_0113 | 0.49 | -0.1 | |
125,209 | - | DvMF_0113 | 0.79 | -0.5 | |
125,270 | - | DvMF_0113 | 0.89 | -0.1 |
Or see this region's nucleotide sequence