Strain Fitness in Shewanella amazonensis SB2B around Sama_3457

Experiment: NAG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG
4,085,505	+				+0.8
4,085,506	-				-0.4
4,085,512	+				-0.7
4,085,512	+				+0.1
4,085,512	+				-0.4
4,085,513	-				-2.1
4,085,513	-				+1.3
4,085,517	+				+0.3
4,085,517	+				+1.0
4,085,517	+				-0.6
4,085,517	+				+1.2
4,085,517	+				+1.4
4,085,517	+				+1.2
4,085,517	+				+0.1
4,085,517	+				+1.0
4,085,517	+				+1.5
4,085,517	+				-0.9
4,085,517	+				+0.3
4,085,517	+				+0.3
4,085,517	+				+0.2
4,085,518	-				+0.9
4,085,518	-				+1.3
4,085,518	-				+0.2
4,085,518	-				+0.5
4,085,518	-				-0.3
4,085,518	-				+1.6
4,085,518	-				+0.9
4,085,518	-				+0.4
4,085,518	-				+0.3
4,085,518	-				-0.4
4,085,518	-				-1.4
4,085,519	+				-0.3
4,085,519	+				+1.0
4,085,519	+				+0.6
4,085,519	+				-1.1
4,085,520	-				+1.2
4,085,558	-				-0.8
4,085,558	-				+0.4
4,085,560	+				+0.5
4,085,561	-				+0.3
4,085,566	+				+0.0
4,085,566	+				+0.4
4,085,570	+				+1.2
4,085,570	+				+0.8
4,085,571	-				+0.8
4,085,594	+				-1.1
4,085,595	-				-0.5
4,085,603	-				-1.1
4,085,603	-				-1.0
4,085,609	+				-0.5
4,085,609	+				-0.7
4,085,609	+				+1.2
4,085,609	+				-0.4
4,085,610	-				-2.1
4,085,618	-				-0.8
4,085,713	+		Sama_3456	0.22	+0.4
4,085,714	-		Sama_3456	0.22	+0.4
4,085,714	-		Sama_3456	0.22	-1.1
4,085,714	-		Sama_3456	0.22	-0.6
4,085,714	-		Sama_3456	0.22	-0.1
4,085,714	-		Sama_3456	0.22	-0.9
4,085,794	+		Sama_3456	0.32	+0.4
4,085,795	-		Sama_3456	0.33	+0.5
4,085,825	-		Sama_3456	0.37	-0.1
4,085,825	-		Sama_3456	0.37	+0.6
4,085,836	+		Sama_3456	0.38	+0.6
4,085,860	-		Sama_3456	0.41	-0.2
4,085,860	-		Sama_3456	0.41	-2.1
4,085,860	-		Sama_3456	0.41	+0.5
4,085,860	-		Sama_3456	0.41	-0.6
4,085,860	-		Sama_3456	0.41	+0.3
4,085,956	+		Sama_3456	0.54	+0.3
4,085,957	-		Sama_3456	0.54	+1.2
4,086,012	+		Sama_3456	0.61	+0.5
4,086,012	+		Sama_3456	0.61	-2.1
4,086,012	+		Sama_3456	0.61	+1.2
4,086,012	+		Sama_3456	0.61	+0.1
4,086,012	+		Sama_3456	0.61	-0.4
4,086,012	+		Sama_3456	0.61	+0.8
4,086,013	-		Sama_3456	0.61	-2.0
4,086,013	-		Sama_3456	0.61	-0.4
4,086,026	-		Sama_3456	0.63	+0.2
4,086,079	-		Sama_3456	0.70	-2.3
4,086,081	+		Sama_3456	0.70	-0.2
4,086,081	+		Sama_3456	0.70	+0.5
4,086,081	+		Sama_3456	0.70	-0.2
4,086,081	+		Sama_3456	0.70	-0.7
4,086,081	+		Sama_3456	0.70	-0.4
4,086,082	-		Sama_3456	0.71	-0.1
4,086,082	-		Sama_3456	0.71	-0.1
4,086,107	+		Sama_3456	0.74	+0.3
4,086,135	+		Sama_3456	0.78	+0.1
4,086,135	+		Sama_3456	0.78	+0.0
4,086,135	+		Sama_3456	0.78	+0.7
4,086,136	-		Sama_3456	0.78	+0.9
4,086,136	-		Sama_3456	0.78	-0.7
4,086,136	-		Sama_3456	0.78	-1.0
4,086,157	+		Sama_3456	0.80	+0.2
4,086,158	-		Sama_3456	0.81	-1.4
4,086,158	-		Sama_3456	0.81	+1.8
4,086,166	+		Sama_3456	0.82	-0.3
4,086,167	-		Sama_3456	0.82	+1.4
4,086,220	+		Sama_3456	0.89	-0.2
4,086,220	+		Sama_3456	0.89	-1.3
4,086,221	-		Sama_3456	0.89	+0.5
4,086,287	+				+1.5
4,086,288	-				-0.6
4,086,288	-				+0.4
4,086,288	-				+0.6
4,086,288	-				+1.9
4,086,304	+				+0.0
4,086,438	-				+1.7
4,086,441	+				+0.1
4,086,441	+				+0.8
4,086,441	+				-0.2
4,086,441	+				-0.8
4,086,441	+				-0.0
4,086,441	+				+0.4
4,086,441	+				-0.7
4,086,441	+				-0.6
4,086,441	+				-0.7
4,086,441	+				+0.4
4,086,441	+				+0.2
4,086,441	+				-1.1
4,086,441	+				-0.6
4,086,442	-				+1.6
4,086,442	-				+0.1
4,086,442	-				-0.2
4,086,442	-				-0.1
4,086,442	-				+1.0
4,086,442	-				+0.2
4,086,442	-				+1.2
4,086,442	-				+0.6
4,086,442	-				-0.8
4,086,442	-				-2.1
4,086,443	+				-1.7
4,086,443	+				+1.2
4,086,444	-				+0.9
4,086,460	-				-0.1
4,086,460	-				+1.0
4,086,460	-				+0.7
4,086,506	-				-0.5
4,086,553	+		Sama_3457	0.12	-0.3
4,086,560	+		Sama_3457	0.13	+1.6
4,086,560	+		Sama_3457	0.13	+1.2
4,086,560	+		Sama_3457	0.13	-0.1
4,086,561	-		Sama_3457	0.13	-1.6
4,086,561	-		Sama_3457	0.13	-0.4
4,086,561	-		Sama_3457	0.13	+0.3
4,086,587	+		Sama_3457	0.18	+0.6
4,086,587	+		Sama_3457	0.18	-0.1
4,086,588	-		Sama_3457	0.18	-1.6
4,086,622	+		Sama_3457	0.23	+2.1
4,086,623	-		Sama_3457	0.24	+1.3
4,086,623	-		Sama_3457	0.24	+0.9
4,086,623	-		Sama_3457	0.24	+0.0
4,086,625	+		Sama_3457	0.24	+0.9
4,086,626	-		Sama_3457	0.24	+0.2
4,086,626	-		Sama_3457	0.24	-2.1
4,086,626	-		Sama_3457	0.24	+1.2
4,086,626	-		Sama_3457	0.24	-0.1
4,086,626	-		Sama_3457	0.24	+1.0
4,086,626	-		Sama_3457	0.24	+1.7
4,086,691	-		Sama_3457	0.35	-0.7
4,086,744	+		Sama_3457	0.44	-1.3
4,086,744	+		Sama_3457	0.44	-0.4
4,086,745	-		Sama_3457	0.44	-1.2
4,086,759	+		Sama_3457	0.46	-0.6
4,086,759	+		Sama_3457	0.46	+1.0
4,086,759	+		Sama_3457	0.46	-0.5
4,086,759	+		Sama_3457	0.46	-1.1
4,086,759	+		Sama_3457	0.46	+1.8
4,086,759	+		Sama_3457	0.46	+1.4
4,086,759	+		Sama_3457	0.46	+0.1
4,086,759	+		Sama_3457	0.46	+0.1
4,086,760	-		Sama_3457	0.46	-0.3
4,086,760	-		Sama_3457	0.46	+0.5
4,086,760	-		Sama_3457	0.46	+1.5
4,086,760	-		Sama_3457	0.46	-0.2
4,086,760	-		Sama_3457	0.46	-0.9
4,086,760	-		Sama_3457	0.46	-0.2
4,086,760	-		Sama_3457	0.46	+0.8
4,086,775	-		Sama_3457	0.49	+0.5
4,086,809	+		Sama_3457	0.54	+0.6
4,086,809	+		Sama_3457	0.54	-0.9
4,086,810	-		Sama_3457	0.54	-1.0
4,086,810	-		Sama_3457	0.54	+1.4
4,086,810	-		Sama_3457	0.54	-1.6
4,086,810	-		Sama_3457	0.54	-0.5
4,086,810	-		Sama_3457	0.54	-0.9
4,086,810	-		Sama_3457	0.54	-0.3
4,086,810	-		Sama_3457	0.54	-2.3
4,086,828	+		Sama_3457	0.57	-0.4
4,086,829	-		Sama_3457	0.57	-1.4
4,086,845	+		Sama_3457	0.60	+0.2
4,086,845	+		Sama_3457	0.60	+0.4
4,086,845	+		Sama_3457	0.60	-0.6
4,086,846	-		Sama_3457	0.60	+0.2
4,087,001	+		Sama_3457	0.86	+0.8
4,087,001	+		Sama_3457	0.86	-0.3
4,087,002	-		Sama_3457	0.86	-1.5
4,087,037	-				+1.2
4,087,037	-				-0.5
4,087,042	+				-0.1
4,087,085	+				-0.7
4,087,104	+				-1.1
4,087,104	+				+0.2
4,087,105	-				+0.3
4,087,105	-				-0.4
4,087,105	-				+0.9
4,087,169	+				-0.1
4,087,169	+				-1.1
4,087,170	-				+0.7
4,087,170	-				-1.1
4,087,170	-				-1.1
4,087,176	+				-1.0
4,087,176	+				+0.1
4,087,176	+				-0.5
4,087,176	+				-1.0
4,087,177	-				-0.8
4,087,177	-				-0.9
4,087,177	-				+0.4
4,087,177	-				-2.0
4,087,177	-				-0.5
4,087,255	+		Sama_3458	0.14	-0.4
4,087,286	+		Sama_3458	0.16	-1.1
4,087,286	+		Sama_3458	0.16	+0.4
4,087,286	+		Sama_3458	0.16	-0.4
4,087,286	+		Sama_3458	0.16	-1.4
4,087,286	+		Sama_3458	0.16	-1.0
4,087,286	+		Sama_3458	0.16	-1.8
4,087,286	+		Sama_3458	0.16	-1.6
4,087,286	+		Sama_3458	0.16	-0.3
4,087,287	-		Sama_3458	0.16	+0.6
4,087,287	-		Sama_3458	0.16	-0.9
4,087,287	-		Sama_3458	0.16	+0.7
4,087,287	-		Sama_3458	0.16	+0.2
4,087,287	-		Sama_3458	0.16	-3.0
4,087,287	-		Sama_3458	0.16	-1.3
4,087,287	-		Sama_3458	0.16	-0.8
4,087,287	-		Sama_3458	0.16	+0.1
4,087,287	-		Sama_3458	0.16	+1.2
4,087,287	-		Sama_3458	0.16	-1.1
4,087,287	-		Sama_3458	0.16	-1.4
4,087,287	-		Sama_3458	0.16	+0.0
4,087,290	+		Sama_3458	0.16	-0.2
4,087,290	+		Sama_3458	0.16	-1.4
4,087,291	-		Sama_3458	0.16	-0.1
4,087,291	-		Sama_3458	0.16	-0.7
4,087,291	-		Sama_3458	0.16	+0.2
4,087,291	-		Sama_3458	0.16	-1.8
4,087,291	-		Sama_3458	0.16	-0.4
4,087,291	-		Sama_3458	0.16	-0.4
4,087,291	-		Sama_3458	0.16	+0.3
4,087,320	+		Sama_3458	0.19	-0.2
4,087,321	-		Sama_3458	0.19	-1.0
4,087,387	-		Sama_3458	0.24	+0.1
4,087,409	-		Sama_3458	0.26	-0.3
4,087,436	+		Sama_3458	0.28	-1.1
4,087,437	-		Sama_3458	0.28	-0.7
4,087,496	+		Sama_3458	0.33	+0.1
4,087,497	-		Sama_3458	0.33	-0.4
4,087,497	-		Sama_3458	0.33	-0.3
4,087,497	-		Sama_3458	0.33	-2.1
4,087,497	-		Sama_3458	0.33	-1.2
4,087,497	-		Sama_3458	0.33	-0.9
4,087,497	-		Sama_3458	0.33	-1.4
4,087,504	+		Sama_3458	0.33	+0.2
4,087,505	-		Sama_3458	0.33	-0.8
4,087,505	-		Sama_3458	0.33	-1.6
4,087,505	-		Sama_3458	0.33	+0.2
4,087,505	-		Sama_3458	0.33	-0.8
4,087,535	-		Sama_3458	0.36	-0.1
4,087,544	-		Sama_3458	0.37	+1.0
4,087,624	+		Sama_3458	0.43	-0.4
4,087,625	-		Sama_3458	0.43	-1.1
4,087,625	-		Sama_3458	0.43	-0.8
4,087,625	-		Sama_3458	0.43	-1.2
4,087,643	+		Sama_3458	0.44	-1.4
4,087,643	+		Sama_3458	0.44	-0.9
4,087,643	+		Sama_3458	0.44	-0.8
4,087,643	+		Sama_3458	0.44	-1.3
4,087,643	+		Sama_3458	0.44	+0.5
4,087,644	-		Sama_3458	0.45	-0.3
4,087,851	+		Sama_3458	0.61	-1.3
4,087,851	+		Sama_3458	0.61	-1.1
4,087,852	-		Sama_3458	0.61	-0.6
4,087,876	+		Sama_3458	0.63	-0.1
4,087,877	-		Sama_3458	0.63	-1.8
4,087,951	+		Sama_3458	0.69	+1.5
4,087,951	+		Sama_3458	0.69	-0.5
4,087,951	+		Sama_3458	0.69	-0.9
4,087,952	-		Sama_3458	0.69	-1.8
4,087,952	-		Sama_3458	0.69	-0.4
4,087,952	-		Sama_3458	0.69	-1.1
4,087,972	+		Sama_3458	0.71	-1.1
4,087,973	-		Sama_3458	0.71	+0.7
4,087,973	-		Sama_3458	0.71	-2.6
4,087,973	-		Sama_3458	0.71	-0.6
4,087,973	-		Sama_3458	0.71	-2.5
4,088,050	-		Sama_3458	0.77	-0.8
4,088,050	-		Sama_3458	0.77	-1.5
4,088,050	-		Sama_3458	0.77	-1.0
4,088,070	+		Sama_3458	0.78	-1.0
4,088,070	+		Sama_3458	0.78	-0.4
4,088,080	-		Sama_3458	0.79	+0.1