Strain Fitness in Shewanella amazonensis SB2B around Sama_3160

Experiment: NAG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG
3,745,168	+				-1.6
3,745,168	+				+0.4
3,745,168	+				+0.3
3,745,168	+				-0.4
3,745,168	+				-1.5
3,745,168	+				-0.3
3,745,169	-				-0.6
3,745,173	+				-1.2
3,745,173	+				+0.3
3,745,173	+				-0.2
3,745,173	+				-0.6
3,745,173	+				-0.4
3,745,174	-				-0.8
3,745,174	-				-0.6
3,745,236	+				-1.0
3,745,236	+				-0.6
3,745,236	+				-0.1
3,745,236	+				-0.1
3,745,236	+				+0.6
3,745,236	+				+0.3
3,745,236	+				-0.6
3,745,236	+				-1.4
3,745,236	+				+1.0
3,745,236	+				+0.8
3,745,236	+				+0.6
3,745,236	+				-2.0
3,745,236	+				-0.4
3,745,236	+				-0.2
3,745,236	+				+2.9
3,745,236	+				-1.1
3,745,237	-				-0.8
3,745,237	-				-0.2
3,745,237	-				+0.0
3,745,237	-				+0.0
3,745,237	-				-0.1
3,745,237	-				-1.9
3,745,237	-				+0.0
3,745,237	-				+0.0
3,745,237	-				-1.0
3,745,237	-				-1.0
3,745,237	-				+0.8
3,745,237	-				-0.5
3,745,237	-				-0.2
3,745,237	-				+0.0
3,745,237	-				-1.1
3,745,237	-				-0.2
3,745,237	-				+1.6
3,745,343	+				+1.2
3,745,343	+				+1.0
3,745,343	+				+0.8
3,745,344	-				+0.3
3,745,344	-				+0.0
3,745,348	-				-0.8
3,745,360	+				-0.3
3,745,361	-				-1.2
3,745,361	-				+0.5
3,745,361	-				+1.9
3,745,361	-				+0.2
3,745,366	+				+0.9
3,745,366	+				+1.0
3,745,366	+				+0.5
3,745,366	+				-0.1
3,745,366	+				-0.6
3,745,367	-				+1.5
3,745,367	-				-0.7
3,745,367	-				-0.6
3,745,367	-				-1.3
3,745,367	-				+2.0
3,745,367	-				-0.6
3,745,367	-				-0.6
3,745,375	+				+0.0
3,745,375	+				-1.0
3,745,375	+				+1.3
3,745,375	+				+0.4
3,745,375	+				+0.4
3,745,375	+				-0.6
3,745,376	-				+1.0
3,745,376	-				-0.8
3,745,376	-				-0.4
3,745,376	-				-1.6
3,745,392	+				-0.6
3,745,392	+				+0.4
3,745,393	-				+0.4
3,745,393	-				+0.4
3,745,393	-				-1.2
3,745,406	+				-1.1
3,745,406	+				-0.7
3,745,407	-				+0.7
3,745,407	-				-0.3
3,745,476	+		Sama_3159	0.12	-0.1
3,745,476	+		Sama_3159	0.12	+0.4
3,745,477	-		Sama_3159	0.12	+0.0
3,745,491	+		Sama_3159	0.14	+0.0
3,745,492	-		Sama_3159	0.14	-1.3
3,745,495	+		Sama_3159	0.14	+0.3
3,745,495	+		Sama_3159	0.14	-0.4
3,745,495	+		Sama_3159	0.14	-0.5
3,745,495	+		Sama_3159	0.14	+0.3
3,745,496	-		Sama_3159	0.14	+0.7
3,745,496	-		Sama_3159	0.14	-1.3
3,745,496	-		Sama_3159	0.14	-0.1
3,745,496	-		Sama_3159	0.14	+1.6
3,745,530	+		Sama_3159	0.19	-0.6
3,745,530	+		Sama_3159	0.19	-0.4
3,745,530	+		Sama_3159	0.19	-1.6
3,745,530	+		Sama_3159	0.19	+0.4
3,745,530	+		Sama_3159	0.19	+0.2
3,745,530	+		Sama_3159	0.19	-1.1
3,745,531	-		Sama_3159	0.20	-0.8
3,745,556	-		Sama_3159	0.23	+0.0
3,745,620	+		Sama_3159	0.32	+3.2
3,745,620	+		Sama_3159	0.32	+1.9
3,745,620	+		Sama_3159	0.32	-0.5
3,745,620	+		Sama_3159	0.32	-0.0
3,745,620	+		Sama_3159	0.32	+0.7
3,745,620	+		Sama_3159	0.32	+0.0
3,745,620	+		Sama_3159	0.32	+1.7
3,745,620	+		Sama_3159	0.32	-0.1
3,745,620	+		Sama_3159	0.32	+0.5
3,745,621	-		Sama_3159	0.33	+0.2
3,745,621	-		Sama_3159	0.33	-1.4
3,745,621	-		Sama_3159	0.33	-0.1
3,745,621	-		Sama_3159	0.33	-1.0
3,745,621	-		Sama_3159	0.33	-0.4
3,745,640	-		Sama_3159	0.35	-2.3
3,745,648	+		Sama_3159	0.37	+0.3
3,745,648	+		Sama_3159	0.37	+0.5
3,745,649	-		Sama_3159	0.37	+0.6
3,745,649	-		Sama_3159	0.37	-0.3
3,745,650	+		Sama_3159	0.37	-0.2
3,745,651	-		Sama_3159	0.37	-1.6
3,745,651	-		Sama_3159	0.37	-2.2
3,745,659	+		Sama_3159	0.38	-0.6
3,745,659	+		Sama_3159	0.38	+0.6
3,745,690	+		Sama_3159	0.43	-0.3
3,745,691	-		Sama_3159	0.43	-2.0
3,745,691	-		Sama_3159	0.43	-0.2
3,745,696	+		Sama_3159	0.43	+0.2
3,745,696	+		Sama_3159	0.43	+1.5
3,745,697	-		Sama_3159	0.44	+0.8
3,745,697	-		Sama_3159	0.44	-1.3
3,745,699	+		Sama_3159	0.44	-0.2
3,745,699	+		Sama_3159	0.44	-0.1
3,745,699	+		Sama_3159	0.44	-1.9
3,745,699	+		Sama_3159	0.44	+0.3
3,745,699	+		Sama_3159	0.44	+2.0
3,745,699	+		Sama_3159	0.44	-0.1
3,745,699	+		Sama_3159	0.44	-0.8
3,745,699	+		Sama_3159	0.44	+0.3
3,745,699	+		Sama_3159	0.44	+0.2
3,745,700	-		Sama_3159	0.44	-1.2
3,745,700	-		Sama_3159	0.44	-0.1
3,745,700	-		Sama_3159	0.44	+0.9
3,745,700	-		Sama_3159	0.44	-0.6
3,745,700	-		Sama_3159	0.44	-0.1
3,745,700	-		Sama_3159	0.44	-0.0
3,745,700	-		Sama_3159	0.44	+0.9
3,745,744	+		Sama_3159	0.50	-0.1
3,745,744	+		Sama_3159	0.50	-0.4
3,745,744	+		Sama_3159	0.50	-0.8
3,745,744	+		Sama_3159	0.50	-0.6
3,745,744	+		Sama_3159	0.50	+0.1
3,745,744	+		Sama_3159	0.50	-0.2
3,745,744	+		Sama_3159	0.50	+0.0
3,745,745	-		Sama_3159	0.51	-0.4
3,745,781	-		Sama_3159	0.56	+1.3
3,745,810	-		Sama_3159	0.60	+1.5
3,745,839	+		Sama_3159	0.64	-2.2
3,745,840	-		Sama_3159	0.64	+0.7
3,745,840	-		Sama_3159	0.64	-1.6
3,745,847	-		Sama_3159	0.65	+0.0
3,745,904	-		Sama_3159	0.74	+0.3
3,745,904	-		Sama_3159	0.74	+0.7
3,745,909	+		Sama_3159	0.74	-1.2
3,745,910	-		Sama_3159	0.74	+0.0
3,745,910	-		Sama_3159	0.74	+0.8
3,745,931	+		Sama_3159	0.78	-1.1
3,745,931	+		Sama_3159	0.78	-1.2
3,745,932	-		Sama_3159	0.78	-1.0
3,745,939	+		Sama_3159	0.79	-0.3
3,745,939	+		Sama_3159	0.79	+0.8
3,745,940	-		Sama_3159	0.79	-1.2
3,745,955	-		Sama_3159	0.81	-0.4
3,745,964	-		Sama_3159	0.82	-0.6
3,746,010	+		Sama_3159	0.89	+1.0
3,746,010	+		Sama_3159	0.89	+0.5
3,746,010	+		Sama_3159	0.89	+0.3
3,746,010	+		Sama_3159	0.89	+1.4
3,746,011	-		Sama_3159	0.89	-1.3
3,746,011	-		Sama_3159	0.89	+0.1
3,746,011	-		Sama_3159	0.89	+0.5
3,746,011	-		Sama_3159	0.89	+0.0
3,746,011	-		Sama_3159	0.89	+0.4
3,746,015	+		Sama_3159	0.90	+0.2
3,746,015	+		Sama_3159	0.90	-0.1
3,746,015	+		Sama_3159	0.90	-2.0
3,746,015	+		Sama_3159	0.90	+1.0
3,746,015	+		Sama_3159	0.90	-1.4
3,746,016	-		Sama_3159	0.90	-0.2
3,746,016	-		Sama_3159	0.90	+1.4
3,746,016	-		Sama_3159	0.90	+0.5
3,746,016	-		Sama_3159	0.90	+0.2
3,746,016	-		Sama_3159	0.90	+0.7
3,746,016	-		Sama_3159	0.90	-0.6
3,746,068	+				-0.6
3,746,069	-				-0.4
3,746,088	-				+1.5
3,746,156	+				-0.6
3,746,156	+				-0.6
3,746,157	-				-4.3
3,746,158	+				-0.6
3,746,158	+				-2.2
3,746,158	+				-2.9
3,746,158	+				-1.6
3,746,158	+				-2.6
3,746,158	+				-0.2
3,746,158	+				-1.8
3,746,158	+				-1.8
3,746,159	-				-3.7
3,746,159	-				-2.8
3,746,159	-				-1.6
3,746,159	-				-2.0
3,746,159	-				-2.3
3,746,159	-				-2.1
3,746,159	-				-1.9
3,746,187	-				-2.0
3,746,267	+		Sama_3160	0.18	-1.9
3,746,267	+		Sama_3160	0.18	+1.0
3,746,267	+		Sama_3160	0.18	-2.4
3,746,376	-		Sama_3160	0.30	-1.4
3,746,376	-		Sama_3160	0.30	-2.2
3,746,376	-		Sama_3160	0.30	-1.3
3,746,412	-		Sama_3160	0.34	-0.8
3,746,421	+		Sama_3160	0.35	-2.3
3,746,421	+		Sama_3160	0.35	-3.2
3,746,421	+		Sama_3160	0.35	-1.9
3,746,422	-		Sama_3160	0.35	-4.5
3,746,426	+		Sama_3160	0.35	-2.7
3,746,427	-		Sama_3160	0.35	-1.0
3,746,427	-		Sama_3160	0.35	-1.8
3,746,474	+		Sama_3160	0.41	-1.2
3,746,475	-		Sama_3160	0.41	-2.5
3,746,476	+		Sama_3160	0.41	-1.3
3,746,476	+		Sama_3160	0.41	-2.7
3,746,476	+		Sama_3160	0.41	-3.3
3,746,476	+		Sama_3160	0.41	-2.0
3,746,476	+		Sama_3160	0.41	-2.9
3,746,477	-		Sama_3160	0.41	-2.0
3,746,477	-		Sama_3160	0.41	-3.0
3,746,477	-		Sama_3160	0.41	-3.2
3,746,477	-		Sama_3160	0.41	-3.2
3,746,477	-		Sama_3160	0.41	-1.5
3,746,501	+		Sama_3160	0.44	-0.9
3,746,502	-		Sama_3160	0.44	-3.6
3,746,508	+		Sama_3160	0.44	-1.1
3,746,592	-		Sama_3160	0.54	-2.0
3,746,592	-		Sama_3160	0.54	-1.6
3,746,592	-		Sama_3160	0.54	-1.6
3,746,592	-		Sama_3160	0.54	-1.0
3,746,592	-		Sama_3160	0.54	-2.4
3,746,592	-		Sama_3160	0.54	-2.4
3,746,613	+		Sama_3160	0.56	-1.8
3,746,613	+		Sama_3160	0.56	-2.1
3,746,613	+		Sama_3160	0.56	-2.2
3,746,614	-		Sama_3160	0.56	-3.3
3,746,614	-		Sama_3160	0.56	-3.0
3,746,618	+		Sama_3160	0.57	-2.0
3,746,618	+		Sama_3160	0.57	-3.1
3,746,618	+		Sama_3160	0.57	-0.5
3,746,618	+		Sama_3160	0.57	-3.4
3,746,618	+		Sama_3160	0.57	+0.0
3,746,624	+		Sama_3160	0.57	-2.8
3,746,624	+		Sama_3160	0.57	-2.9
3,746,625	-		Sama_3160	0.57	-1.8
3,746,625	-		Sama_3160	0.57	+0.4
3,746,636	+		Sama_3160	0.58	-2.7
3,746,637	-		Sama_3160	0.59	-2.5
3,746,637	-		Sama_3160	0.59	-1.3
3,746,639	+		Sama_3160	0.59	-1.6
3,746,640	-		Sama_3160	0.59	-2.2
3,746,640	-		Sama_3160	0.59	-2.1
3,746,678	+		Sama_3160	0.63	-2.7
3,746,678	+		Sama_3160	0.63	-2.6
3,746,678	+		Sama_3160	0.63	-2.0
3,746,678	+		Sama_3160	0.63	-3.9
3,746,679	-		Sama_3160	0.63	-3.9
3,746,679	-		Sama_3160	0.63	-3.8
3,746,714	+		Sama_3160	0.67	-2.6
3,746,757	+		Sama_3160	0.72	-3.4
3,746,757	+		Sama_3160	0.72	-1.9
3,746,757	+		Sama_3160	0.72	-1.9
3,746,758	-		Sama_3160	0.72	-1.4
3,746,758	-		Sama_3160	0.72	-3.7
3,746,758	-		Sama_3160	0.72	-2.7
3,746,758	-		Sama_3160	0.72	-1.0
3,746,797	+		Sama_3160	0.76	-1.3
3,746,797	+		Sama_3160	0.76	-2.0
3,746,797	+		Sama_3160	0.76	-0.4
3,746,797	+		Sama_3160	0.76	-4.3
3,746,797	+		Sama_3160	0.76	+2.0
3,746,797	+		Sama_3160	0.76	-2.1
3,746,797	+		Sama_3160	0.76	-2.0
3,746,798	-		Sama_3160	0.76	+0.0
3,746,798	-		Sama_3160	0.76	-1.6
3,746,798	-		Sama_3160	0.76	-2.9
3,746,798	-		Sama_3160	0.76	-2.8
3,746,798	-		Sama_3160	0.76	-2.2
3,746,798	-		Sama_3160	0.76	-2.3
3,746,805	-		Sama_3160	0.77	-3.0
3,746,805	-		Sama_3160	0.77	-0.4
3,746,891	+		Sama_3160	0.87	-1.2
3,746,892	-		Sama_3160	0.87	-2.6
3,746,892	-		Sama_3160	0.87	-1.8
3,746,892	-		Sama_3160	0.87	-2.2
3,746,892	-		Sama_3160	0.87	-3.3
3,746,892	-		Sama_3160	0.87	-1.8
3,746,899	+		Sama_3160	0.88	-2.6
3,746,899	+		Sama_3160	0.88	-2.8
3,746,899	+		Sama_3160	0.88	-1.0
3,746,899	+		Sama_3160	0.88	-2.0
3,746,900	-		Sama_3160	0.88	-2.2
3,746,900	-		Sama_3160	0.88	-0.6
3,746,900	-		Sama_3160	0.88	-2.7
3,746,900	-		Sama_3160	0.88	+0.0
3,746,910	-		Sama_3160	0.89	-2.4
3,746,910	-		Sama_3160	0.89	-1.7
3,746,916	+		Sama_3160	0.89	-3.9
3,746,916	+		Sama_3160	0.89	-1.3
3,746,916	+		Sama_3160	0.89	-3.0
3,746,916	+		Sama_3160	0.89	-1.6
3,746,916	+		Sama_3160	0.89	-2.5
3,746,917	-		Sama_3160	0.90	-1.0
3,746,917	-		Sama_3160	0.90	-2.8
3,746,917	-		Sama_3160	0.90	-1.5
3,746,920	-		Sama_3160	0.90	-1.4
3,746,975	-				-2.2
3,746,975	-				-1.1
3,746,975	-				-2.3
3,747,017	+				-0.6
3,747,017	+				-1.8
3,747,017	+				-1.0
3,747,017	+				-2.0
3,747,017	+				-2.2
3,747,018	-				-1.8
3,747,018	-				-0.7
3,747,018	-				-2.9
3,747,018	-				-1.2
3,747,019	+				-1.3
3,747,019	+				-0.6
3,747,019	+				-2.6
3,747,020	-				-0.8
3,747,020	-				-2.0
3,747,020	-				-2.2
3,747,020	-				-2.2
3,747,021	-				-0.8
3,747,049	+				-0.7
3,747,066	+				-1.8
3,747,069	+				-1.9
3,747,069	+				-1.5
3,747,069	+				-3.4
3,747,069	+				-1.9
3,747,069	+				-0.6
3,747,069	+				-2.1
3,747,091	+				-1.2
3,747,092	-				+0.6
3,747,092	-				+0.2
3,747,092	-				+0.2
3,747,173	-				+1.0
3,747,173	-				-0.4
3,747,203	+				+1.1
3,747,203	+				+0.5
3,747,339	-		Sama_3161	0.14	+0.6
3,747,339	-		Sama_3161	0.14	+0.8
3,747,339	-		Sama_3161	0.14	+0.8
3,747,339	-		Sama_3161	0.14	+1.3
3,747,339	-		Sama_3161	0.14	-0.0
3,747,339	-		Sama_3161	0.14	+1.2
3,747,339	-		Sama_3161	0.14	-1.3
3,747,342	+		Sama_3161	0.15	-0.3
3,747,342	+		Sama_3161	0.15	-0.9
3,747,342	+		Sama_3161	0.15	+0.6
3,747,342	+		Sama_3161	0.15	-1.0
3,747,343	-		Sama_3161	0.15	-0.1
3,747,343	-		Sama_3161	0.15	+0.5
3,747,343	-		Sama_3161	0.15	+0.2
3,747,343	-		Sama_3161	0.15	+1.1
3,747,343	-		Sama_3161	0.15	-0.2
3,747,360	-		Sama_3161	0.16	-1.8
3,747,391	+		Sama_3161	0.17	+0.2
3,747,392	-		Sama_3161	0.17	+0.4
3,747,392	-		Sama_3161	0.17	+1.2
3,747,419	+		Sama_3161	0.19	+0.7
3,747,419	+		Sama_3161	0.19	+0.1
3,747,419	+		Sama_3161	0.19	+1.0
3,747,420	-		Sama_3161	0.19	+0.3
3,747,420	-		Sama_3161	0.19	+0.2
3,747,444	-		Sama_3161	0.20	+1.5
3,747,444	-		Sama_3161	0.20	+1.5
3,747,444	-		Sama_3161	0.20	-0.4
3,747,476	+		Sama_3161	0.22	+1.4
3,747,568	-		Sama_3161	0.28	+0.3
3,747,623	-		Sama_3161	0.31	+0.6
3,747,623	-		Sama_3161	0.31	-1.4
3,747,623	-		Sama_3161	0.31	+0.3
3,747,732	-		Sama_3161	0.37	+0.4
3,747,756	-		Sama_3161	0.38	+0.1
3,747,796	+		Sama_3161	0.41	+0.8
3,747,797	-		Sama_3161	0.41	+0.7
3,747,826	+		Sama_3161	0.43	-1.6
3,747,826	+		Sama_3161	0.43	-2.2
3,747,827	-		Sama_3161	0.43	-0.7
3,747,827	-		Sama_3161	0.43	+1.2
3,747,829	+		Sama_3161	0.43	-0.7
3,747,830	-		Sama_3161	0.43	-0.2
3,747,830	-		Sama_3161	0.43	-0.4
3,747,830	-		Sama_3161	0.43	-0.8
3,747,894	-		Sama_3161	0.46	-0.9
3,747,894	-		Sama_3161	0.46	+0.2
3,747,919	+		Sama_3161	0.48	-1.3
3,747,920	-		Sama_3161	0.48	+0.1
3,747,920	-		Sama_3161	0.48	+0.8
3,747,920	-		Sama_3161	0.48	-1.3
3,747,958	+		Sama_3161	0.50	+0.7
3,747,958	+		Sama_3161	0.50	-0.2
3,747,958	+		Sama_3161	0.50	-0.5
3,747,958	+		Sama_3161	0.50	+0.9
3,747,958	+		Sama_3161	0.50	-0.4
3,747,958	+		Sama_3161	0.50	-0.9
3,747,958	+		Sama_3161	0.50	+0.1
3,747,958	+		Sama_3161	0.50	+0.4
3,747,959	-		Sama_3161	0.50	+1.5
3,747,959	-		Sama_3161	0.50	-0.7
3,747,991	+		Sama_3161	0.52	+0.7
3,747,992	-		Sama_3161	0.52	-0.6
3,747,992	-		Sama_3161	0.52	+0.0
3,747,992	-		Sama_3161	0.52	-1.8
3,747,992	-		Sama_3161	0.52	-0.3
3,747,992	-		Sama_3161	0.52	-0.5
3,747,992	-		Sama_3161	0.52	+0.4
3,747,992	-		Sama_3161	0.52	+0.9
3,747,992	-		Sama_3161	0.52	-0.1
3,747,992	-		Sama_3161	0.52	+0.0
3,747,992	-		Sama_3161	0.52	+0.2
3,747,992	-		Sama_3161	0.52	+0.0
3,747,992	-		Sama_3161	0.52	-1.1
3,747,992	-		Sama_3161	0.52	-2.6
3,747,998	+		Sama_3161	0.52	+0.4
3,747,998	+		Sama_3161	0.52	-0.3
3,747,999	-		Sama_3161	0.53	+0.8