Strain Fitness in Shewanella amazonensis SB2B around Sama_2266

Experiment: NAG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG
2,730,647	+				-1.3
2,730,647	+				+0.4
2,730,661	+				-1.1
2,730,703	-				+0.7
2,730,703	-				-0.7
2,730,703	-				+0.5
2,730,703	-				-0.9
2,730,703	-				+0.4
2,730,704	+				-0.7
2,730,704	+				+0.4
2,730,704	+				-0.5
2,730,704	+				-0.2
2,730,704	+				-0.4
2,730,704	+				+0.1
2,730,705	-				+0.7
2,730,705	-				+1.0
2,730,713	+				+0.3
2,730,714	-				-0.5
2,730,714	-				-2.5
2,730,714	-				-1.2
2,730,753	-		Sama_2265	0.12	-0.3
2,730,782	+		Sama_2265	0.18	-0.9
2,730,987	+		Sama_2265	0.58	-1.3
2,730,988	-		Sama_2265	0.59	-1.0
2,730,988	-		Sama_2265	0.59	-0.5
2,730,988	-		Sama_2265	0.59	+0.1
2,730,988	-		Sama_2265	0.59	-1.4
2,730,997	-		Sama_2265	0.60	-2.3
2,730,997	-		Sama_2265	0.60	-0.5
2,730,997	-		Sama_2265	0.60	-1.8
2,730,997	-		Sama_2265	0.60	-0.8
2,731,030	-		Sama_2265	0.67	-2.3
2,731,034	-		Sama_2265	0.68	-0.9
2,731,065	+		Sama_2265	0.74	-1.7
2,731,065	+		Sama_2265	0.74	-0.5
2,731,065	+		Sama_2265	0.74	-1.9
2,731,066	-		Sama_2265	0.74	-0.1
2,731,066	-		Sama_2265	0.74	-0.9
2,731,066	-		Sama_2265	0.74	-2.0
2,731,066	-		Sama_2265	0.74	-2.4
2,731,087	-		Sama_2265	0.78	-0.1
2,731,094	+		Sama_2265	0.80	-0.5
2,731,094	+		Sama_2265	0.80	-0.3
2,731,094	+		Sama_2265	0.80	+0.5
2,731,095	-		Sama_2265	0.80	-0.6
2,731,095	-		Sama_2265	0.80	-1.5
2,731,095	-		Sama_2265	0.80	-1.7
2,731,095	-		Sama_2265	0.80	-1.4
2,731,095	-		Sama_2265	0.80	+0.9
2,731,112	-		Sama_2265	0.83	-0.8
2,731,170	-				-2.2
2,731,174	+				-0.3
2,731,174	+				+0.4
2,731,174	+				-1.5
2,731,174	+				-3.2
2,731,175	-				-1.8
2,731,175	-				-1.2
2,731,175	-				-0.5
2,731,183	+				-1.8
2,731,183	+				-0.3
2,731,184	-				-2.6
2,731,198	+				-2.2
2,731,198	+				-1.9
2,731,198	+				-1.2
2,731,198	+				-1.5
2,731,198	+				-2.5
2,731,198	+				-2.8
2,731,198	+				-1.6
2,731,198	+				-0.9
2,731,199	-				+0.5
2,731,199	-				-1.2
2,731,199	-				-1.0
2,731,199	-				-1.0
2,731,199	-				-0.5
2,731,199	-				-0.1
2,731,207	+				-2.5
2,731,208	-				+0.0
2,731,208	-				-0.5
2,731,210	+				-0.3
2,731,210	+				-1.5
2,731,276	+				-1.8
2,731,313	+				+0.1
2,731,379	+				-1.0
2,731,380	-				-0.5
2,731,380	-				-1.0
2,731,384	+				-2.1
2,731,418	+				+0.1
2,731,418	+				+0.5
2,731,418	+				-1.2
2,731,422	+				+0.3
2,731,422	+				-1.4
2,731,422	+				-0.5
2,731,422	+				-1.0
2,731,422	+				-1.9
2,731,422	+				-2.4
2,731,422	+				-2.3
2,731,422	+				-2.9
2,731,422	+				-0.3
2,731,422	+				+0.5
2,731,422	+				-1.0
2,731,422	+				-0.8
2,731,423	-				+2.3
2,731,423	-				+3.8
2,731,423	-				+3.5
2,731,444	+				-0.7
2,731,453	+				-1.0
2,731,453	+				+0.3
2,731,458	+				-1.1
2,731,517	+				-1.0
2,731,517	+				-2.0
2,731,532	-				+2.3
2,731,588	+				+1.7
2,731,588	+				+1.5
2,731,588	+				-0.5
2,731,588	+				+0.1
2,731,588	+				+2.7
2,731,589	-				+2.0
2,731,606	+				+2.8
2,731,606	+				+2.5
2,731,607	-				+2.6
2,731,621	-				+3.4
2,731,621	-				+3.0
2,731,642	+				+3.1
2,731,642	+				+2.8
2,731,642	+				+3.0
2,731,643	-				+1.5
2,731,713	-				+3.2
2,731,739	+				+3.1
2,731,779	+		Sama_2266	0.11	+0.5
2,731,816	+		Sama_2266	0.13	+2.5
2,731,835	+		Sama_2266	0.14	+1.5
2,731,835	+		Sama_2266	0.14	+2.6
2,731,870	+		Sama_2266	0.17	+2.5
2,731,888	+		Sama_2266	0.18	+3.3
2,731,889	-		Sama_2266	0.18	+2.4
2,731,933	+		Sama_2266	0.21	+1.8
2,731,980	+		Sama_2266	0.24	+2.9
2,731,980	+		Sama_2266	0.24	+2.0
2,731,980	+		Sama_2266	0.24	+2.5
2,731,981	-		Sama_2266	0.24	+2.1
2,731,981	-		Sama_2266	0.24	+3.0
2,731,981	-		Sama_2266	0.24	+1.9
2,732,006	-		Sama_2266	0.26	+1.7
2,732,042	-		Sama_2266	0.29	+2.8
2,732,096	-		Sama_2266	0.32	+2.9
2,732,105	+		Sama_2266	0.33	+3.1
2,732,105	+		Sama_2266	0.33	+3.5
2,732,106	-		Sama_2266	0.33	+3.0
2,732,106	-		Sama_2266	0.33	+1.9
2,732,106	-		Sama_2266	0.33	+2.3
2,732,106	-		Sama_2266	0.33	+2.7
2,732,114	-		Sama_2266	0.33	+3.1
2,732,122	-		Sama_2266	0.34	+1.9
2,732,122	-		Sama_2266	0.34	+2.0
2,732,141	-		Sama_2266	0.35	+2.4
2,732,168	+		Sama_2266	0.37	+3.1
2,732,168	+		Sama_2266	0.37	+2.7
2,732,176	+		Sama_2266	0.38	+1.7
2,732,177	-		Sama_2266	0.38	+3.6
2,732,177	-		Sama_2266	0.38	+2.2
2,732,266	+		Sama_2266	0.44	+3.4
2,732,272	+		Sama_2266	0.44	+3.1
2,732,329	+		Sama_2266	0.48	+2.6
2,732,344	+		Sama_2266	0.49	+0.9
2,732,344	+		Sama_2266	0.49	+2.9
2,732,400	+		Sama_2266	0.53	+2.8
2,732,487	+		Sama_2266	0.59	+2.5
2,732,488	-		Sama_2266	0.59	+2.7
2,732,495	-		Sama_2266	0.59	+2.6
2,732,554	+		Sama_2266	0.63	+4.1
2,732,554	+		Sama_2266	0.63	+2.3
2,732,554	+		Sama_2266	0.63	+1.8
2,732,555	-		Sama_2266	0.63	+1.0
2,732,641	+		Sama_2266	0.69	+3.1
2,732,641	+		Sama_2266	0.69	+3.1
2,732,642	-		Sama_2266	0.69	+2.5
2,732,642	-		Sama_2266	0.69	+2.4
2,732,764	+		Sama_2266	0.78	+2.7
2,732,764	+		Sama_2266	0.78	+2.4
2,732,764	+		Sama_2266	0.78	+2.9
2,732,797	-		Sama_2266	0.80	+3.0
2,732,797	-		Sama_2266	0.80	+1.8
2,732,917	+		Sama_2266	0.88	+3.7
2,732,917	+		Sama_2266	0.88	+3.2
2,732,917	+		Sama_2266	0.88	+3.8
2,732,918	-		Sama_2266	0.88	+1.9
2,732,966	+				+2.0
2,732,967	-				+2.2
2,733,121	+				+1.0
2,733,146	+				+0.7
2,733,147	-				+1.5
2,733,169	-				+1.1
2,733,176	-				+0.2
2,733,213	+				-0.1
2,733,213	+				-1.0
2,733,220	+				+0.6
2,733,220	+				+0.4
2,733,244	-				+1.0
2,733,259	-				+1.4
2,733,262	-				+0.5
2,733,262	-				-1.8
2,733,262	-				+0.0
2,733,262	-				-0.3
2,733,267	+				-0.5
2,733,278	+				+0.3
2,733,284	-				+0.4
2,733,392	-				+0.8
2,733,449	+				+1.3
2,733,449	+				+0.4
2,733,449	+				+0.4
2,733,463	+				+0.7
2,733,540	+				+0.3
2,733,541	-		Sama_2267	0.10	+0.4
2,733,625	+		Sama_2267	0.18	-0.0
2,733,626	-		Sama_2267	0.18	+1.5
2,733,648	+		Sama_2267	0.20	+1.6
2,733,649	-		Sama_2267	0.20	+0.5
2,733,662	+		Sama_2267	0.21	-0.5
2,733,663	-		Sama_2267	0.21	-0.1
2,733,711	+		Sama_2267	0.25	+0.7
2,733,728	+		Sama_2267	0.27	-0.6
2,733,728	+		Sama_2267	0.27	+0.4
2,733,728	+		Sama_2267	0.27	+0.8
2,733,729	-		Sama_2267	0.27	+1.2
2,733,764	-		Sama_2267	0.30	+0.9
2,733,782	+		Sama_2267	0.32	+0.5
2,733,796	-		Sama_2267	0.33	+2.3
2,733,796	-		Sama_2267	0.33	+0.5
2,733,817	-		Sama_2267	0.35	+2.4
2,733,817	-		Sama_2267	0.35	+0.9
2,733,847	-		Sama_2267	0.38	+2.4
2,733,853	-		Sama_2267	0.38	+1.7
2,733,921	-		Sama_2267	0.44	+1.2
2,733,921	-		Sama_2267	0.44	-0.6
2,733,928	+		Sama_2267	0.45	+0.5
2,733,929	-		Sama_2267	0.45	+0.7
2,733,960	+		Sama_2267	0.48	+0.7
2,733,987	+		Sama_2267	0.50	+3.0
2,733,998	+		Sama_2267	0.51	-0.8
2,733,998	+		Sama_2267	0.51	+1.7
2,734,020	-		Sama_2267	0.53	+1.1