Strain Fitness in Shewanella amazonensis SB2B around Sama_2178

Experiment: Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine
2,634,061	+		Sama_2177	0.57	+0.0
2,634,061	+		Sama_2177	0.57	-0.1
2,634,062	-		Sama_2177	0.57	+0.8
2,634,062	-		Sama_2177	0.57	-1.8
2,634,062	-		Sama_2177	0.57	-0.9
2,634,062	-		Sama_2177	0.57	+0.3
2,634,062	-		Sama_2177	0.57	+1.4
2,634,062	-		Sama_2177	0.57	-0.7
2,634,062	-		Sama_2177	0.57	-0.7
2,634,149	+		Sama_2177	0.63	-0.2
2,634,149	+		Sama_2177	0.63	-0.1
2,634,221	+		Sama_2177	0.68	-0.0
2,634,221	+		Sama_2177	0.68	+0.5
2,634,279	+		Sama_2177	0.72	+1.4
2,634,279	+		Sama_2177	0.72	-0.7
2,634,279	+		Sama_2177	0.72	-0.2
2,634,280	-		Sama_2177	0.72	-1.3
2,634,317	-		Sama_2177	0.75	+1.3
2,634,317	-		Sama_2177	0.75	-0.1
2,634,317	-		Sama_2177	0.75	-0.5
2,634,354	-		Sama_2177	0.77	+1.2
2,634,411	+		Sama_2177	0.81	-0.6
2,634,411	+		Sama_2177	0.81	+0.3
2,634,412	-		Sama_2177	0.81	+0.2
2,634,412	-		Sama_2177	0.81	+2.0
2,634,412	-		Sama_2177	0.81	+0.2
2,634,412	-		Sama_2177	0.81	-0.4
2,634,412	-		Sama_2177	0.81	-0.1
2,634,412	-		Sama_2177	0.81	-0.4
2,634,412	-		Sama_2177	0.81	-0.9
2,634,477	+		Sama_2177	0.86	+0.6
2,634,504	-		Sama_2177	0.88	+1.0
2,634,574	+				-1.9
2,634,718	-				-1.7
2,634,725	+				-0.4
2,634,846	+				+2.1
2,634,946	+				+2.0
2,634,947	-				-0.4
2,634,954	+				-0.9
2,634,960	+				-2.7
2,635,037	+				+0.6
2,635,037	+				-0.3
2,635,037	+				-0.5
2,635,038	-				-0.7
2,635,247	+		Sama_2178	0.18	+0.8
2,635,247	+		Sama_2178	0.18	-0.2
2,635,247	+		Sama_2178	0.18	+0.5
2,635,248	-		Sama_2178	0.18	-0.1
2,635,248	-		Sama_2178	0.18	-0.1
2,635,269	+		Sama_2178	0.20	-0.3
2,635,269	+		Sama_2178	0.20	-0.5
2,635,282	+		Sama_2178	0.21	-0.7
2,635,297	+		Sama_2178	0.22	-0.3
2,635,333	+		Sama_2178	0.24	-1.1
2,635,352	+		Sama_2178	0.26	+0.1
2,635,352	+		Sama_2178	0.26	+0.0
2,635,355	+		Sama_2178	0.26	-0.4
2,635,355	+		Sama_2178	0.26	+0.6
2,635,356	-		Sama_2178	0.26	+0.3
2,635,356	-		Sama_2178	0.26	-0.9
2,635,356	-		Sama_2178	0.26	-0.2
2,635,375	+		Sama_2178	0.28	-0.1
2,635,392	+		Sama_2178	0.29	+0.1
2,635,392	+		Sama_2178	0.29	-0.8
2,635,471	+		Sama_2178	0.35	+0.0
2,635,501	+		Sama_2178	0.37	-0.2
2,635,501	+		Sama_2178	0.37	-1.1
2,635,513	+		Sama_2178	0.38	+0.6
2,635,551	+		Sama_2178	0.41	+0.8
2,635,551	+		Sama_2178	0.41	+0.1
2,635,592	+		Sama_2178	0.44	-0.7
2,635,592	+		Sama_2178	0.44	+0.0
2,635,615	+		Sama_2178	0.46	+0.8
2,635,659	+		Sama_2178	0.49	+0.5
2,635,718	+		Sama_2178	0.54	-0.4
2,635,726	+		Sama_2178	0.54	+1.2
2,635,754	+		Sama_2178	0.56	-0.4
2,635,754	+		Sama_2178	0.56	-0.4
2,635,820	+		Sama_2178	0.61	+0.4
2,635,820	+		Sama_2178	0.61	+1.0
2,635,912	+		Sama_2178	0.68	+2.6
2,636,009	+		Sama_2178	0.76	+0.6
2,636,009	+		Sama_2178	0.76	-1.2
2,636,047	+		Sama_2178	0.78	+0.3
2,636,048	-		Sama_2178	0.78	-1.2
2,636,051	+		Sama_2178	0.79	-0.5
2,636,051	+		Sama_2178	0.79	-0.0
2,636,051	+		Sama_2178	0.79	+0.3
2,636,051	+		Sama_2178	0.79	-1.7
2,636,051	+		Sama_2178	0.79	+1.2
2,636,052	-		Sama_2178	0.79	+0.2
2,636,087	+		Sama_2178	0.81	+0.3
2,636,087	+		Sama_2178	0.81	+0.6
2,636,087	+		Sama_2178	0.81	+0.6
2,636,106	+		Sama_2178	0.83	-0.7
2,636,106	+		Sama_2178	0.83	-1.3
2,636,106	+		Sama_2178	0.83	+2.1
2,636,107	-		Sama_2178	0.83	-0.5
2,636,174	+		Sama_2178	0.88	-1.7
2,636,174	+		Sama_2178	0.88	+1.3
2,636,174	+		Sama_2178	0.88	+0.1
2,636,174	+		Sama_2178	0.88	-0.9
2,636,174	+		Sama_2178	0.88	+0.4
2,636,174	+		Sama_2178	0.88	+0.4
2,636,175	-		Sama_2178	0.88	-1.1
2,636,175	-		Sama_2178	0.88	-0.4
2,636,175	-		Sama_2178	0.88	-0.1
2,636,300	+				+0.9
2,636,300	+				+0.6
2,636,300	+				-0.2
2,636,300	+				-0.6
2,636,300	+				-0.4
2,636,301	-				+0.9
2,636,303	+				-0.8
2,636,315	+				-0.9
2,636,315	+				-0.1
2,636,315	+				-0.0
2,636,316	-				+0.1
2,636,321	+				-0.5
2,636,321	+				-0.0
2,636,321	+				-0.1
2,636,321	+				-0.4
2,636,321	+				+1.1
2,636,322	-				+0.3
2,636,327	+				+0.5
2,636,328	-				-0.3
2,636,526	+		Sama_2179	0.18	+0.3
2,636,527	-		Sama_2179	0.19	-0.2
2,636,544	-		Sama_2179	0.23	+0.5
2,636,594	+		Sama_2179	0.36	+0.1
2,636,605	-		Sama_2179	0.39	+0.6
2,636,605	-		Sama_2179	0.39	-0.0
2,636,605	-		Sama_2179	0.39	+0.4
2,636,641	-		Sama_2179	0.49	-1.4
2,636,666	+		Sama_2179	0.55	+0.6
2,636,667	-		Sama_2179	0.56	-1.5
2,636,672	+		Sama_2179	0.57	+0.4
2,636,672	+		Sama_2179	0.57	-0.2
2,636,673	-		Sama_2179	0.57	-3.4
2,636,693	-		Sama_2179	0.62	+0.2
2,636,798	+				-1.9
2,636,798	+				+2.0
2,636,874	+				-0.2
2,636,875	-				-1.1
2,636,875	-				+1.3
2,636,875	-				-2.4
2,637,012	+		Sama_2180	0.14	-0.3
2,637,013	-		Sama_2180	0.14	+0.5
2,637,075	+		Sama_2180	0.23	+1.6
2,637,076	-		Sama_2180	0.23	-0.6
2,637,076	-		Sama_2180	0.23	+0.1
2,637,076	-		Sama_2180	0.23	-1.6
2,637,091	-		Sama_2180	0.25	-0.6
2,637,128	+		Sama_2180	0.30	+0.4
2,637,129	-		Sama_2180	0.30	-0.6
2,637,245	+		Sama_2180	0.46	-0.6
2,637,267	-		Sama_2180	0.50	-0.0
2,637,299	+		Sama_2180	0.54	+0.1
2,637,299	+		Sama_2180	0.54	-0.2
2,637,299	+		Sama_2180	0.54	-0.9
2,637,299	+		Sama_2180	0.54	-2.7
2,637,300	-		Sama_2180	0.54	-0.8
2,637,317	-		Sama_2180	0.56	+0.3
2,637,324	+		Sama_2180	0.57	-0.4
2,637,325	-		Sama_2180	0.58	-1.4