Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2548

Experiment: m.b. perchlorate 50 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. perchlorate 50 mM
2,702,758	+		Dshi_2546	0.53	+2.1
2,702,766	-		Dshi_2546	0.54	+0.6
2,702,864	-		Dshi_2546	0.63	+0.4
2,702,874	-		Dshi_2546	0.64	+0.4
2,702,886	-		Dshi_2546	0.65	-0.1
2,703,041	-		Dshi_2546	0.80	-1.1
2,703,046	-		Dshi_2546	0.81	-0.5
2,703,090	+		Dshi_2546	0.85	-0.6
2,703,106	+		Dshi_2546	0.86	+0.4
2,703,106	+		Dshi_2546	0.86	-0.1
2,703,147	-				-0.2
2,703,177	+				+0.2
2,703,249	+				+0.4
2,703,332	-				+3.9
2,703,350	-				-0.1
2,703,373	+				+0.9
2,703,377	+				+0.1
2,703,385	-		Dshi_2547	0.11	+0.9
2,703,415	-		Dshi_2547	0.19	+0.4
2,703,429	-		Dshi_2547	0.23	+0.7
2,703,434	-		Dshi_2547	0.24	+3.5
2,703,436	+		Dshi_2547	0.25	+0.4
2,703,436	+		Dshi_2547	0.25	-0.1
2,703,451	+		Dshi_2547	0.29	+1.7
2,703,451	+		Dshi_2547	0.29	-0.1
2,703,454	-		Dshi_2547	0.29	-0.6
2,703,459	-		Dshi_2547	0.31	-0.1
2,703,479	-		Dshi_2547	0.36	-0.7
2,703,578	+		Dshi_2547	0.62	+0.3
2,703,586	-		Dshi_2547	0.64	+0.2
2,703,586	-		Dshi_2547	0.64	-0.4
2,703,601	-		Dshi_2547	0.68	+0.6
2,703,663	+		Dshi_2547	0.84	+2.4
2,703,671	-		Dshi_2547	0.86	+0.2
2,703,731	-				-0.5
2,703,742	+				-0.3
2,703,742	+				+2.2
2,703,750	-				-0.8
2,703,804	+				-0.9
2,703,817	-				+0.7
2,703,844	+				-1.1
2,703,912	-				-0.2
2,703,926	+				+0.6
2,703,926	+				-0.2
2,703,926	+				-1.0
2,703,934	-				-0.8
2,703,934	-				+0.6
2,703,934	-				+2.5
2,703,950	+				-1.5
2,703,992	+				+0.8
2,704,122	-				-0.9
2,704,139	-				-0.2
2,704,147	-				+0.8
2,704,147	-				+1.9
2,704,163	+		Dshi_2548	0.10	-2.0
2,704,215	-		Dshi_2548	0.11	+0.8
2,704,295	+		Dshi_2548	0.13	-0.2
2,704,301	+		Dshi_2548	0.13	-0.6
2,704,302	+		Dshi_2548	0.13	-0.4
2,704,302	+		Dshi_2548	0.13	-1.0
2,704,303	-		Dshi_2548	0.13	+2.1
2,704,395	-		Dshi_2548	0.16	-1.0
2,704,442	-		Dshi_2548	0.17	-1.1
2,704,452	+		Dshi_2548	0.17	-1.3
2,704,452	+		Dshi_2548	0.17	+0.6
2,704,452	+		Dshi_2548	0.17	-1.0
2,704,452	+		Dshi_2548	0.17	+1.1
2,704,460	-		Dshi_2548	0.17	-1.7
2,704,460	-		Dshi_2548	0.17	+2.6
2,704,460	-		Dshi_2548	0.17	+0.2
2,704,465	+		Dshi_2548	0.17	+1.2
2,704,500	-		Dshi_2548	0.18	+0.6
2,704,511	+		Dshi_2548	0.18	+1.1
2,704,572	+		Dshi_2548	0.20	-0.9
2,704,720	-		Dshi_2548	0.23	-0.9
2,704,727	-		Dshi_2548	0.23	-0.3
2,704,727	-		Dshi_2548	0.23	+0.5
2,704,797	+		Dshi_2548	0.25	+0.8
2,704,815	+		Dshi_2548	0.26	-0.9
2,704,820	+		Dshi_2548	0.26	-1.6
2,704,824	+		Dshi_2548	0.26	-2.9
2,704,869	+		Dshi_2548	0.27	+0.0
2,704,906	+		Dshi_2548	0.28	+1.5
2,705,018	-		Dshi_2548	0.30	+0.7
2,705,073	-		Dshi_2548	0.32	-0.6
2,705,116	-		Dshi_2548	0.33	+2.0
2,705,121	+		Dshi_2548	0.33	+0.1
2,705,128	-		Dshi_2548	0.33	+1.4
2,705,128	-		Dshi_2548	0.33	-1.4
2,705,151	-		Dshi_2548	0.34	+0.3
2,705,160	-		Dshi_2548	0.34	-0.3
2,705,301	+		Dshi_2548	0.37	-0.0
2,705,304	+		Dshi_2548	0.37	-1.6
2,705,309	-		Dshi_2548	0.37	+0.0
2,705,312	-		Dshi_2548	0.37	-1.2
2,705,413	-		Dshi_2548	0.40	-0.9
2,705,421	-		Dshi_2548	0.40	-1.7
2,705,448	-		Dshi_2548	0.41	+0.1
2,705,448	-		Dshi_2548	0.41	-1.2
2,705,518	-		Dshi_2548	0.42	-0.8
2,705,524	+		Dshi_2548	0.42	+0.5
2,705,584	-		Dshi_2548	0.44	-0.1
2,705,750	+		Dshi_2548	0.48	-0.1
2,705,750	+		Dshi_2548	0.48	+0.1
2,705,750	+		Dshi_2548	0.48	-2.5
2,705,758	-		Dshi_2548	0.48	+3.1
2,705,758	-		Dshi_2548	0.48	-0.3
2,705,758	-		Dshi_2548	0.48	+2.0
2,705,762	-		Dshi_2548	0.48	-0.8
2,705,772	+		Dshi_2548	0.48	+1.4
2,705,814	-		Dshi_2548	0.49	+0.6
2,705,827	+		Dshi_2548	0.50	+0.9
2,705,874	-		Dshi_2548	0.51	+0.3
2,705,933	+		Dshi_2548	0.52	-0.0
2,705,941	-		Dshi_2548	0.52	-0.0
2,705,941	-		Dshi_2548	0.52	+1.4
2,706,268	+		Dshi_2548	0.60	+0.4
2,706,268	+		Dshi_2548	0.60	+0.6
2,706,276	-		Dshi_2548	0.60	+0.6
2,706,301	+		Dshi_2548	0.61	-0.4
2,706,338	-		Dshi_2548	0.62	-0.1
2,706,359	+		Dshi_2548	0.62	-1.2
2,706,366	-		Dshi_2548	0.62	-1.4
2,706,381	+		Dshi_2548	0.63	+1.2
2,706,442	-		Dshi_2548	0.64	-0.5
2,706,510	-		Dshi_2548	0.66	-1.0
2,706,526	+		Dshi_2548	0.66	-1.0
2,706,526	+		Dshi_2548	0.66	+1.0
2,706,627	+		Dshi_2548	0.69	+0.0
2,706,635	-		Dshi_2548	0.69	+0.7
2,706,646	-		Dshi_2548	0.69	+1.8
2,706,646	-		Dshi_2548	0.69	+0.5
2,706,701	-		Dshi_2548	0.70	-2.0
2,706,732	+		Dshi_2548	0.71	+0.7
2,706,735	-		Dshi_2548	0.71	+0.6
2,706,771	+		Dshi_2548	0.72	-0.8
2,706,781	-		Dshi_2548	0.72	+0.4
2,706,785	-		Dshi_2548	0.72	-0.0
2,706,794	+		Dshi_2548	0.73	+0.4
2,706,802	-		Dshi_2548	0.73	+0.1
2,706,839	+		Dshi_2548	0.74	+0.3
2,706,872	-		Dshi_2548	0.74	+0.1
2,707,057	-		Dshi_2548	0.79	+0.4
2,707,071	+		Dshi_2548	0.79	-2.2
2,707,113	+		Dshi_2548	0.80	+0.4
2,707,217	-		Dshi_2548	0.83	-0.6
2,707,351	+		Dshi_2548	0.86	-0.6
2,707,352	-		Dshi_2548	0.86	+0.6
2,707,457	-		Dshi_2548	0.88	-0.7
2,707,462	+		Dshi_2548	0.88	-0.1
2,707,499	-		Dshi_2548	0.89	+0.8
2,707,523	-		Dshi_2548	0.90	+0.6
2,707,562	+				+0.2
2,707,570	-				-0.2
2,707,616	+				-0.4
2,707,616	+				+1.0
2,707,727	+				+0.4
2,707,824	+				-0.1
2,707,850	+				+0.4
2,707,857	+				-0.3
2,707,866	-				-1.5
2,707,866	-				+3.2
2,707,869	+				-0.5
2,707,885	-				+4.0
2,707,942	+				+0.2
2,708,140	+		Dshi_2549	0.12	+0.2
2,708,149	+		Dshi_2549	0.13	+0.4
2,708,150	-		Dshi_2549	0.13	-0.3
2,708,233	+		Dshi_2549	0.19	-0.4
2,708,319	-		Dshi_2549	0.25	+1.4
2,708,340	-		Dshi_2549	0.26	+1.6
2,708,516	+		Dshi_2549	0.38	-0.2
2,708,536	+		Dshi_2549	0.39	+1.7
2,708,550	-		Dshi_2549	0.40	+0.3
2,708,673	-		Dshi_2549	0.48	+0.8
2,708,712	+		Dshi_2549	0.51	-1.4
2,708,712	+		Dshi_2549	0.51	-0.4
2,708,719	+		Dshi_2549	0.51	-0.6
2,708,720	-		Dshi_2549	0.51	-1.0
2,708,768	-		Dshi_2549	0.55	-0.9
2,708,832	+		Dshi_2549	0.59	-0.6
2,708,832	+		Dshi_2549	0.59	-0.4
2,708,837	+		Dshi_2549	0.59	+1.2
2,708,868	-		Dshi_2549	0.61	-0.9
2,708,903	+		Dshi_2549	0.64	-1.0
2,708,944	-		Dshi_2549	0.67	-0.6