Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0836 and Dshi_0837 are separated by 11 nucleotides Dshi_0837 and Dshi_0838 are separated by 280 nucleotides
Dshi_0836: Dshi_0836 - acetyl-CoA acetyltransferase (RefSeq), at 846,270 to 847,481
_0836
Dshi_0837: Dshi_0837 - Glutathione S-transferase domain (RefSeq), at 847,493 to 848,128
_0837
Dshi_0838: Dshi_0838 - acyl-CoA dehydrogenase domain protein (RefSeq), at 848,409 to 849,557
_0838
Position (kb)
847
848
849 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 846.506 kb on + strand, within Dshi_0836 at 846.569 kb on + strand, within Dshi_0836 at 846.627 kb on - strand, within Dshi_0836 at 846.820 kb on - strand, within Dshi_0836 at 846.890 kb on - strand, within Dshi_0836 at 846.938 kb on - strand, within Dshi_0836 at 846.967 kb on + strand, within Dshi_0836 at 847.035 kb on - strand, within Dshi_0836 at 847.076 kb on - strand, within Dshi_0836 at 847.229 kb on + strand, within Dshi_0836 at 847.367 kb on - strand at 847.440 kb on - strand at 847.472 kb on - strand at 847.511 kb on + strand at 847.511 kb on + strand at 847.520 kb on + strand at 847.533 kb on - strand at 847.554 kb on + strand at 847.555 kb on + strand at 847.561 kb on - strand, within Dshi_0837 at 847.562 kb on - strand, within Dshi_0837 at 847.615 kb on + strand, within Dshi_0837 at 847.672 kb on + strand, within Dshi_0837 at 847.682 kb on + strand, within Dshi_0837 at 847.885 kb on - strand, within Dshi_0837 at 847.933 kb on + strand, within Dshi_0837 at 847.942 kb on - strand, within Dshi_0837 at 848.004 kb on - strand, within Dshi_0837 at 848.004 kb on - strand, within Dshi_0837 at 848.137 kb on - strand at 848.158 kb on - strand at 848.165 kb on + strand at 848.168 kb on - strand at 848.254 kb on + strand at 848.257 kb on - strand at 848.269 kb on - strand at 848.381 kb on - strand at 848.389 kb on - strand at 848.407 kb on + strand at 848.415 kb on - strand at 848.490 kb on - strand at 848.666 kb on - strand, within Dshi_0838 at 848.667 kb on + strand, within Dshi_0838 at 848.694 kb on + strand, within Dshi_0838 at 848.697 kb on - strand, within Dshi_0838 at 848.725 kb on - strand, within Dshi_0838 at 848.959 kb on - strand, within Dshi_0838 at 848.980 kb on + strand, within Dshi_0838 at 849.010 kb on + strand, within Dshi_0838 at 849.012 kb on + strand, within Dshi_0838
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 846,506 + Dshi_0836 0.19 -0.1 846,569 + Dshi_0836 0.25 +2.1 846,627 - Dshi_0836 0.29 -2.4 846,820 - Dshi_0836 0.45 +0.8 846,890 - Dshi_0836 0.51 +1.4 846,938 - Dshi_0836 0.55 -0.9 846,967 + Dshi_0836 0.58 -2.4 847,035 - Dshi_0836 0.63 +0.0 847,076 - Dshi_0836 0.67 +3.0 847,229 + Dshi_0836 0.79 +4.0 847,367 - -1.7 847,440 - +0.1 847,472 - -0.4 847,511 + -0.1 847,511 + -0.6 847,520 + +0.6 847,533 - +2.3 847,554 + +1.3 847,555 + +0.3 847,561 - Dshi_0837 0.11 +0.1 847,562 - Dshi_0837 0.11 -2.3 847,615 + Dshi_0837 0.19 -1.3 847,672 + Dshi_0837 0.28 -0.8 847,682 + Dshi_0837 0.30 -1.0 847,885 - Dshi_0837 0.62 +1.5 847,933 + Dshi_0837 0.69 -0.4 847,942 - Dshi_0837 0.71 -0.1 848,004 - Dshi_0837 0.80 -0.9 848,004 - Dshi_0837 0.80 +0.4 848,137 - -0.4 848,158 - +1.9 848,165 + +0.6 848,168 - +4.3 848,254 + +1.3 848,257 - -1.1 848,269 - -1.6 848,381 - -0.5 848,389 - -1.2 848,407 + -0.7 848,415 - +1.0 848,490 - +1.8 848,666 - Dshi_0838 0.22 +0.1 848,667 + Dshi_0838 0.22 +0.2 848,694 + Dshi_0838 0.25 +5.0 848,697 - Dshi_0838 0.25 +1.9 848,725 - Dshi_0838 0.28 +0.3 848,959 - Dshi_0838 0.48 +0.8 848,980 + Dshi_0838 0.50 -2.1 849,010 + Dshi_0838 0.52 -3.3 849,012 + Dshi_0838 0.52 -1.3
Or see this region's nucleotide sequence