Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0743 and Dshi_0744 are separated by 81 nucleotides Dshi_0744 and Dshi_0745 are separated by 188 nucleotides Dshi_0745 and Dshi_0746 are separated by 97 nucleotides
Dshi_0743: Dshi_0743 - MscS Mechanosensitive ion channel (RefSeq), at 750,674 to 752,056
_0743
Dshi_0744: Dshi_0744 - prolyl-tRNA synthetase (RefSeq), at 752,138 to 753,475
_0744
Dshi_0745: Dshi_0745 - Redoxin domain protein (RefSeq), at 753,664 to 754,239
_0745
Dshi_0746: Dshi_0746 - MIP family channel protein (RefSeq), at 754,337 to 755,023
_0746
Position (kb) 752
753
754 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 751.194 kb on - strand, within Dshi_0743 at 751.260 kb on + strand, within Dshi_0743 at 751.261 kb on + strand, within Dshi_0743 at 751.268 kb on - strand, within Dshi_0743 at 751.425 kb on - strand, within Dshi_0743 at 751.479 kb on + strand, within Dshi_0743 at 751.479 kb on + strand, within Dshi_0743 at 751.487 kb on - strand, within Dshi_0743 at 751.519 kb on - strand, within Dshi_0743 at 751.539 kb on - strand, within Dshi_0743 at 751.576 kb on + strand, within Dshi_0743 at 751.582 kb on + strand, within Dshi_0743 at 751.595 kb on + strand, within Dshi_0743 at 751.608 kb on - strand, within Dshi_0743 at 751.609 kb on - strand, within Dshi_0743 at 751.705 kb on + strand, within Dshi_0743 at 751.712 kb on - strand, within Dshi_0743 at 751.712 kb on - strand, within Dshi_0743 at 751.723 kb on - strand, within Dshi_0743 at 751.792 kb on - strand, within Dshi_0743 at 751.888 kb on - strand, within Dshi_0743 at 752.033 kb on + strand at 752.078 kb on + strand at 753.477 kb on - strand at 753.492 kb on + strand at 753.537 kb on - strand at 753.574 kb on - strand at 753.644 kb on + strand at 753.652 kb on - strand at 753.678 kb on - strand at 753.758 kb on - strand, within Dshi_0745 at 753.796 kb on + strand, within Dshi_0745 at 753.825 kb on + strand, within Dshi_0745 at 753.876 kb on + strand, within Dshi_0745 at 753.908 kb on - strand, within Dshi_0745 at 753.972 kb on - strand, within Dshi_0745 at 754.086 kb on + strand, within Dshi_0745 at 754.105 kb on + strand, within Dshi_0745 at 754.223 kb on - strand at 754.223 kb on - strand at 754.337 kb on - strand at 754.469 kb on - strand, within Dshi_0746 at 754.475 kb on + strand, within Dshi_0746
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 751,194 - Dshi_0743 0.38 -2.1 751,260 + Dshi_0743 0.42 +0.1 751,261 + Dshi_0743 0.42 -2.7 751,268 - Dshi_0743 0.43 -0.5 751,425 - Dshi_0743 0.54 +2.5 751,479 + Dshi_0743 0.58 +0.7 751,479 + Dshi_0743 0.58 -2.5 751,487 - Dshi_0743 0.59 -0.2 751,519 - Dshi_0743 0.61 +1.5 751,539 - Dshi_0743 0.63 -2.8 751,576 + Dshi_0743 0.65 -1.8 751,582 + Dshi_0743 0.66 -0.1 751,595 + Dshi_0743 0.67 +1.5 751,608 - Dshi_0743 0.68 -1.8 751,609 - Dshi_0743 0.68 -1.8 751,705 + Dshi_0743 0.75 +0.5 751,712 - Dshi_0743 0.75 +1.5 751,712 - Dshi_0743 0.75 +0.0 751,723 - Dshi_0743 0.76 -1.1 751,792 - Dshi_0743 0.81 +0.5 751,888 - Dshi_0743 0.88 +1.5 752,033 + +0.0 752,078 + -1.1 753,477 - +0.9 753,492 + -0.5 753,537 - +1.2 753,574 - -0.1 753,644 + -0.2 753,652 - -1.4 753,678 - -0.2 753,758 - Dshi_0745 0.16 -2.8 753,796 + Dshi_0745 0.23 +0.2 753,825 + Dshi_0745 0.28 -1.0 753,876 + Dshi_0745 0.37 +1.5 753,908 - Dshi_0745 0.42 +0.9 753,972 - Dshi_0745 0.53 +0.1 754,086 + Dshi_0745 0.73 -1.0 754,105 + Dshi_0745 0.77 -0.7 754,223 - +0.0 754,223 - +2.4 754,337 - +4.5 754,469 - Dshi_0746 0.19 +0.1 754,475 + Dshi_0746 0.20 -1.5
Or see this region's nucleotide sequence