Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0480 and Dshi_0481 are separated by 51 nucleotides Dshi_0481 and Dshi_0482 are separated by 467 nucleotides
Dshi_0480: Dshi_0480 - hypothetical protein (RefSeq), at 464,801 to 465,967
_0480
Dshi_0481: Dshi_0481 - hypothetical protein (RefSeq), at 466,019 to 466,831
_0481
Dshi_0482: Dshi_0482 - hypothetical protein (RefSeq), at 467,299 to 467,784
_0482
Position (kb) 466
467 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 465.024 kb on - strand, within Dshi_0480 at 465.034 kb on + strand, within Dshi_0480 at 465.042 kb on + strand, within Dshi_0480 at 465.070 kb on - strand, within Dshi_0480 at 465.082 kb on + strand, within Dshi_0480 at 465.099 kb on - strand, within Dshi_0480 at 465.100 kb on - strand, within Dshi_0480 at 465.123 kb on - strand, within Dshi_0480 at 465.194 kb on + strand, within Dshi_0480 at 465.195 kb on + strand, within Dshi_0480 at 465.217 kb on + strand, within Dshi_0480 at 465.217 kb on + strand, within Dshi_0480 at 465.253 kb on - strand, within Dshi_0480 at 465.265 kb on + strand, within Dshi_0480 at 465.272 kb on - strand, within Dshi_0480 at 465.276 kb on + strand, within Dshi_0480 at 465.341 kb on + strand, within Dshi_0480 at 465.376 kb on + strand, within Dshi_0480 at 465.376 kb on + strand, within Dshi_0480 at 465.376 kb on + strand, within Dshi_0480 at 465.416 kb on - strand, within Dshi_0480 at 465.416 kb on - strand, within Dshi_0480 at 465.484 kb on + strand, within Dshi_0480 at 465.509 kb on + strand, within Dshi_0480 at 465.519 kb on + strand, within Dshi_0480 at 465.519 kb on + strand, within Dshi_0480 at 465.519 kb on + strand, within Dshi_0480 at 465.519 kb on + strand, within Dshi_0480 at 465.521 kb on - strand, within Dshi_0480 at 465.524 kb on + strand, within Dshi_0480 at 465.524 kb on + strand, within Dshi_0480 at 465.527 kb on - strand, within Dshi_0480 at 465.527 kb on - strand, within Dshi_0480 at 465.536 kb on + strand, within Dshi_0480 at 465.601 kb on + strand, within Dshi_0480 at 465.623 kb on - strand, within Dshi_0480 at 465.699 kb on + strand, within Dshi_0480 at 465.716 kb on + strand, within Dshi_0480 at 465.773 kb on + strand, within Dshi_0480 at 465.833 kb on - strand, within Dshi_0480 at 465.843 kb on - strand, within Dshi_0480 at 465.856 kb on + strand at 465.856 kb on + strand at 465.857 kb on - strand at 465.861 kb on + strand at 465.861 kb on + strand at 465.861 kb on + strand at 465.862 kb on - strand at 465.864 kb on - strand at 465.869 kb on - strand at 465.869 kb on - strand at 465.875 kb on + strand at 465.880 kb on + strand at 465.882 kb on + strand at 465.900 kb on + strand at 465.910 kb on + strand at 465.943 kb on + strand at 465.951 kb on - strand at 465.983 kb on + strand at 465.983 kb on + strand at 466.010 kb on + strand at 466.012 kb on + strand at 466.020 kb on - strand at 466.077 kb on - strand at 466.090 kb on + strand at 466.090 kb on + strand at 466.098 kb on - strand at 466.098 kb on - strand at 466.237 kb on - strand, within Dshi_0481 at 466.241 kb on + strand, within Dshi_0481 at 466.241 kb on + strand, within Dshi_0481 at 466.246 kb on - strand, within Dshi_0481 at 466.246 kb on - strand, within Dshi_0481 at 466.246 kb on - strand, within Dshi_0481 at 466.261 kb on + strand, within Dshi_0481 at 466.264 kb on - strand, within Dshi_0481 at 466.297 kb on + strand, within Dshi_0481 at 466.297 kb on + strand, within Dshi_0481 at 466.331 kb on + strand, within Dshi_0481 at 466.334 kb on - strand, within Dshi_0481 at 466.351 kb on - strand, within Dshi_0481 at 466.433 kb on - strand, within Dshi_0481 at 466.486 kb on - strand, within Dshi_0481 at 466.583 kb on - strand, within Dshi_0481 at 466.583 kb on - strand, within Dshi_0481 at 466.583 kb on - strand, within Dshi_0481 at 466.637 kb on + strand, within Dshi_0481 at 466.637 kb on + strand, within Dshi_0481 at 466.674 kb on - strand, within Dshi_0481 at 466.702 kb on + strand, within Dshi_0481 at 466.702 kb on + strand, within Dshi_0481 at 466.703 kb on - strand, within Dshi_0481 at 466.710 kb on - strand, within Dshi_0481 at 466.710 kb on - strand, within Dshi_0481 at 466.731 kb on + strand, within Dshi_0481 at 466.743 kb on + strand, within Dshi_0481 at 466.743 kb on + strand, within Dshi_0481 at 466.743 kb on + strand, within Dshi_0481 at 466.743 kb on + strand, within Dshi_0481 at 466.743 kb on + strand, within Dshi_0481 at 466.743 kb on + strand, within Dshi_0481 at 466.743 kb on + strand, within Dshi_0481 at 466.743 kb on + strand, within Dshi_0481 at 466.743 kb on + strand, within Dshi_0481 at 466.743 kb on + strand, within Dshi_0481 at 466.751 kb on - strand at 466.751 kb on - strand at 466.751 kb on - strand at 466.751 kb on - strand at 466.763 kb on - strand at 466.763 kb on - strand at 466.786 kb on + strand at 466.799 kb on - strand at 466.799 kb on - strand at 466.819 kb on - strand at 466.854 kb on + strand at 466.856 kb on + strand at 466.864 kb on - strand at 466.891 kb on + strand at 466.894 kb on - strand at 466.963 kb on + strand at 466.963 kb on + strand at 466.963 kb on + strand at 466.963 kb on + strand at 466.971 kb on - strand at 466.971 kb on - strand at 466.971 kb on - strand at 466.986 kb on + strand at 467.017 kb on + strand at 467.025 kb on - strand at 467.025 kb on - strand at 467.045 kb on + strand at 467.059 kb on + strand at 467.159 kb on + strand at 467.169 kb on + strand at 467.169 kb on + strand at 467.169 kb on + strand at 467.169 kb on + strand at 467.169 kb on + strand at 467.177 kb on - strand at 467.177 kb on - strand at 467.211 kb on - strand at 467.217 kb on - strand at 467.252 kb on + strand at 467.252 kb on + strand at 467.253 kb on + strand at 467.253 kb on + strand at 467.271 kb on + strand at 467.271 kb on + strand at 467.286 kb on + strand at 467.294 kb on - strand at 467.334 kb on - strand at 467.346 kb on + strand at 467.351 kb on + strand, within Dshi_0482 at 467.354 kb on - strand, within Dshi_0482 at 467.356 kb on + strand, within Dshi_0482 at 467.356 kb on + strand, within Dshi_0482 at 467.356 kb on + strand, within Dshi_0482 at 467.361 kb on + strand, within Dshi_0482 at 467.364 kb on - strand, within Dshi_0482 at 467.393 kb on + strand, within Dshi_0482 at 467.393 kb on + strand, within Dshi_0482 at 467.393 kb on + strand, within Dshi_0482 at 467.393 kb on + strand, within Dshi_0482 at 467.393 kb on + strand, within Dshi_0482 at 467.401 kb on - strand, within Dshi_0482 at 467.401 kb on - strand, within Dshi_0482 at 467.401 kb on - strand, within Dshi_0482 at 467.401 kb on - strand, within Dshi_0482 at 467.401 kb on - strand, within Dshi_0482 at 467.401 kb on - strand, within Dshi_0482 at 467.403 kb on + strand, within Dshi_0482 at 467.411 kb on - strand, within Dshi_0482 at 467.411 kb on - strand, within Dshi_0482 at 467.427 kb on + strand, within Dshi_0482 at 467.427 kb on + strand, within Dshi_0482 at 467.427 kb on + strand, within Dshi_0482 at 467.435 kb on - strand, within Dshi_0482 at 467.435 kb on - strand, within Dshi_0482 at 467.435 kb on - strand, within Dshi_0482 at 467.452 kb on + strand, within Dshi_0482 at 467.453 kb on - strand, within Dshi_0482 at 467.482 kb on + strand, within Dshi_0482 at 467.482 kb on + strand, within Dshi_0482 at 467.482 kb on + strand, within Dshi_0482 at 467.482 kb on + strand, within Dshi_0482 at 467.490 kb on - strand, within Dshi_0482 at 467.495 kb on + strand, within Dshi_0482 at 467.495 kb on + strand, within Dshi_0482 at 467.500 kb on + strand, within Dshi_0482 at 467.587 kb on - strand, within Dshi_0482 at 467.589 kb on + strand, within Dshi_0482 at 467.589 kb on + strand, within Dshi_0482 at 467.597 kb on + strand, within Dshi_0482 at 467.597 kb on - strand, within Dshi_0482 at 467.597 kb on - strand, within Dshi_0482 at 467.597 kb on - strand, within Dshi_0482 at 467.603 kb on + strand, within Dshi_0482 at 467.634 kb on - strand, within Dshi_0482 at 467.636 kb on + strand, within Dshi_0482 at 467.659 kb on - strand, within Dshi_0482 at 467.661 kb on + strand, within Dshi_0482 at 467.670 kb on - strand, within Dshi_0482 at 467.704 kb on + strand, within Dshi_0482 at 467.704 kb on + strand, within Dshi_0482 at 467.709 kb on + strand, within Dshi_0482 at 467.711 kb on - strand, within Dshi_0482 at 467.711 kb on - strand, within Dshi_0482 at 467.717 kb on - strand, within Dshi_0482 at 467.723 kb on + strand, within Dshi_0482 at 467.723 kb on + strand, within Dshi_0482 at 467.750 kb on + strand at 467.758 kb on - strand at 467.758 kb on - strand at 467.820 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 465,024 - Dshi_0480 0.19 +1.2 465,034 + Dshi_0480 0.20 -0.6 465,042 + Dshi_0480 0.21 -0.3 465,070 - Dshi_0480 0.23 -0.3 465,082 + Dshi_0480 0.24 +0.0 465,099 - Dshi_0480 0.26 +0.6 465,100 - Dshi_0480 0.26 -0.7 465,123 - Dshi_0480 0.28 -0.2 465,194 + Dshi_0480 0.34 +0.6 465,195 + Dshi_0480 0.34 +0.8 465,217 + Dshi_0480 0.36 -0.5 465,217 + Dshi_0480 0.36 -0.8 465,253 - Dshi_0480 0.39 +0.2 465,265 + Dshi_0480 0.40 +0.8 465,272 - Dshi_0480 0.40 +1.4 465,276 + Dshi_0480 0.41 +0.1 465,341 + Dshi_0480 0.46 -0.3 465,376 + Dshi_0480 0.49 -0.6 465,376 + Dshi_0480 0.49 -0.9 465,376 + Dshi_0480 0.49 +1.4 465,416 - Dshi_0480 0.53 +1.6 465,416 - Dshi_0480 0.53 -0.0 465,484 + Dshi_0480 0.59 -0.1 465,509 + Dshi_0480 0.61 +0.4 465,519 + Dshi_0480 0.62 +0.5 465,519 + Dshi_0480 0.62 -0.8 465,519 + Dshi_0480 0.62 +0.7 465,519 + Dshi_0480 0.62 -1.2 465,521 - Dshi_0480 0.62 -0.1 465,524 + Dshi_0480 0.62 -0.3 465,524 + Dshi_0480 0.62 -0.7 465,527 - Dshi_0480 0.62 +0.4 465,527 - Dshi_0480 0.62 -0.1 465,536 + Dshi_0480 0.63 -0.1 465,601 + Dshi_0480 0.69 -2.3 465,623 - Dshi_0480 0.70 -0.2 465,699 + Dshi_0480 0.77 +0.4 465,716 + Dshi_0480 0.78 -0.6 465,773 + Dshi_0480 0.83 +2.8 465,833 - Dshi_0480 0.88 +0.5 465,843 - Dshi_0480 0.89 +2.0 465,856 + -0.6 465,856 + +1.3 465,857 - +0.2 465,861 + -0.8 465,861 + +0.3 465,861 + +1.8 465,862 - -0.6 465,864 - +0.5 465,869 - +0.3 465,869 - +0.2 465,875 + +0.5 465,880 + +1.0 465,882 + -1.8 465,900 + +0.4 465,910 + -0.1 465,943 + +4.1 465,951 - -0.7 465,983 + -2.0 465,983 + +2.1 466,010 + -2.6 466,012 + -0.8 466,020 - -0.6 466,077 - -0.3 466,090 + -0.0 466,090 + -0.1 466,098 - +0.5 466,098 - -0.8 466,237 - Dshi_0481 0.27 +1.8 466,241 + Dshi_0481 0.27 +0.4 466,241 + Dshi_0481 0.27 -0.6 466,246 - Dshi_0481 0.28 -2.6 466,246 - Dshi_0481 0.28 +0.1 466,246 - Dshi_0481 0.28 +0.2 466,261 + Dshi_0481 0.30 +1.9 466,264 - Dshi_0481 0.30 +0.4 466,297 + Dshi_0481 0.34 -0.2 466,297 + Dshi_0481 0.34 -0.2 466,331 + Dshi_0481 0.38 +0.5 466,334 - Dshi_0481 0.39 +0.9 466,351 - Dshi_0481 0.41 +0.8 466,433 - Dshi_0481 0.51 -0.2 466,486 - Dshi_0481 0.57 -0.9 466,583 - Dshi_0481 0.69 -1.2 466,583 - Dshi_0481 0.69 +2.4 466,583 - Dshi_0481 0.69 +1.7 466,637 + Dshi_0481 0.76 -0.9 466,637 + Dshi_0481 0.76 +0.8 466,674 - Dshi_0481 0.81 -1.8 466,702 + Dshi_0481 0.84 -1.1 466,702 + Dshi_0481 0.84 -0.4 466,703 - Dshi_0481 0.84 +0.3 466,710 - Dshi_0481 0.85 -0.5 466,710 - Dshi_0481 0.85 -0.2 466,731 + Dshi_0481 0.88 -0.7 466,743 + Dshi_0481 0.89 +0.7 466,743 + Dshi_0481 0.89 +0.7 466,743 + Dshi_0481 0.89 -0.4 466,743 + Dshi_0481 0.89 -0.1 466,743 + Dshi_0481 0.89 -1.4 466,743 + Dshi_0481 0.89 -0.1 466,743 + Dshi_0481 0.89 -0.7 466,743 + Dshi_0481 0.89 +0.1 466,743 + Dshi_0481 0.89 -0.9 466,743 + Dshi_0481 0.89 -0.2 466,751 - -0.6 466,751 - -1.1 466,751 - -0.1 466,751 - -0.5 466,763 - -0.3 466,763 - +0.1 466,786 + +0.3 466,799 - -1.0 466,799 - +0.4 466,819 - +0.3 466,854 + +0.6 466,856 + -1.0 466,864 - -1.2 466,891 + -2.0 466,894 - -1.2 466,963 + -0.8 466,963 + -2.2 466,963 + +0.5 466,963 + +0.1 466,971 - -0.5 466,971 - -0.2 466,971 - -0.5 466,986 + +0.4 467,017 + -1.0 467,025 - -1.1 467,025 - -0.8 467,045 + -0.3 467,059 + +1.0 467,159 + +0.2 467,169 + +0.4 467,169 + +0.9 467,169 + +1.2 467,169 + -0.3 467,169 + +0.2 467,177 - +1.0 467,177 - +0.9 467,211 - -4.1 467,217 - -0.8 467,252 + -0.1 467,252 + -0.2 467,253 + +1.1 467,253 + +0.3 467,271 + -0.8 467,271 + +0.2 467,286 + -1.7 467,294 - -0.8 467,334 - +0.9 467,346 + +0.9 467,351 + Dshi_0482 0.11 -0.6 467,354 - Dshi_0482 0.11 +0.8 467,356 + Dshi_0482 0.12 -1.0 467,356 + Dshi_0482 0.12 +0.3 467,356 + Dshi_0482 0.12 +0.0 467,361 + Dshi_0482 0.13 -0.6 467,364 - Dshi_0482 0.13 -0.0 467,393 + Dshi_0482 0.19 +0.5 467,393 + Dshi_0482 0.19 -1.7 467,393 + Dshi_0482 0.19 -1.1 467,393 + Dshi_0482 0.19 -0.2 467,393 + Dshi_0482 0.19 -0.2 467,401 - Dshi_0482 0.21 +1.3 467,401 - Dshi_0482 0.21 -0.5 467,401 - Dshi_0482 0.21 +0.8 467,401 - Dshi_0482 0.21 -0.4 467,401 - Dshi_0482 0.21 -0.9 467,401 - Dshi_0482 0.21 -1.4 467,403 + Dshi_0482 0.21 -0.7 467,411 - Dshi_0482 0.23 +4.6 467,411 - Dshi_0482 0.23 +0.5 467,427 + Dshi_0482 0.26 -1.5 467,427 + Dshi_0482 0.26 +1.1 467,427 + Dshi_0482 0.26 -0.1 467,435 - Dshi_0482 0.28 -0.7 467,435 - Dshi_0482 0.28 -0.4 467,435 - Dshi_0482 0.28 -1.3 467,452 + Dshi_0482 0.31 -0.2 467,453 - Dshi_0482 0.32 -2.2 467,482 + Dshi_0482 0.38 +1.1 467,482 + Dshi_0482 0.38 +0.5 467,482 + Dshi_0482 0.38 -0.8 467,482 + Dshi_0482 0.38 +3.6 467,490 - Dshi_0482 0.39 -0.9 467,495 + Dshi_0482 0.40 -2.6 467,495 + Dshi_0482 0.40 -0.3 467,500 + Dshi_0482 0.41 +0.2 467,587 - Dshi_0482 0.59 -0.8 467,589 + Dshi_0482 0.60 -0.3 467,589 + Dshi_0482 0.60 -1.3 467,597 + Dshi_0482 0.61 -1.7 467,597 - Dshi_0482 0.61 +0.9 467,597 - Dshi_0482 0.61 +0.6 467,597 - Dshi_0482 0.61 -0.3 467,603 + Dshi_0482 0.63 -2.2 467,634 - Dshi_0482 0.69 -0.2 467,636 + Dshi_0482 0.69 +0.8 467,659 - Dshi_0482 0.74 +0.9 467,661 + Dshi_0482 0.74 +0.8 467,670 - Dshi_0482 0.76 +0.7 467,704 + Dshi_0482 0.83 -0.8 467,704 + Dshi_0482 0.83 +0.8 467,709 + Dshi_0482 0.84 +0.9 467,711 - Dshi_0482 0.85 -0.3 467,711 - Dshi_0482 0.85 +0.2 467,717 - Dshi_0482 0.86 -0.7 467,723 + Dshi_0482 0.87 +0.5 467,723 + Dshi_0482 0.87 -1.1 467,750 + +2.0 467,758 - -0.5 467,758 - +0.6 467,820 - +0.5
Or see this region's nucleotide sequence