Strain Fitness in Marinobacter adhaerens HP15 around HP15_4111

Experiment: L-Glutamine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_4110 and HP15_4111 are separated by 104 nucleotidesHP15_4111 and HP15_4112 are separated by 126 nucleotides HP15_4110: HP15_4110 - conserved hypothetical protein, at 4,342,414 to 4,344,696 _4110 HP15_4111: HP15_4111 - NADH/ubiquinone/plastoquinone (complex I), at 4,344,801 to 4,346,375 _4111 HP15_4112: HP15_4112 - methyl-accepting chemotaxis protein, at 4,346,502 to 4,348,427 _4112 Position (kb) 4344 4345 4346 4347Strain fitness (log2 ratio) -2 -1 0 1at 4343.938 kb on - strand, within HP15_4110at 4343.985 kb on + strand, within HP15_4110at 4344.006 kb on + strand, within HP15_4110at 4344.080 kb on + strand, within HP15_4110at 4344.108 kb on - strand, within HP15_4110at 4344.117 kb on + strand, within HP15_4110at 4344.136 kb on + strand, within HP15_4110at 4344.302 kb on + strand, within HP15_4110at 4344.370 kb on - strand, within HP15_4110at 4344.375 kb on + strand, within HP15_4110at 4344.534 kb on - strandat 4344.591 kb on + strandat 4344.613 kb on - strandat 4344.761 kb on - strandat 4345.022 kb on - strand, within HP15_4111at 4345.027 kb on + strand, within HP15_4111at 4345.109 kb on - strand, within HP15_4111at 4345.111 kb on + strand, within HP15_4111at 4345.112 kb on - strand, within HP15_4111at 4345.119 kb on - strand, within HP15_4111at 4345.121 kb on - strand, within HP15_4111at 4345.126 kb on + strand, within HP15_4111at 4345.318 kb on - strand, within HP15_4111at 4345.394 kb on - strand, within HP15_4111at 4345.394 kb on - strand, within HP15_4111at 4345.394 kb on - strand, within HP15_4111at 4345.440 kb on - strand, within HP15_4111at 4345.450 kb on - strand, within HP15_4111at 4345.499 kb on + strand, within HP15_4111at 4345.507 kb on - strand, within HP15_4111at 4345.507 kb on - strand, within HP15_4111at 4345.507 kb on - strand, within HP15_4111at 4345.529 kb on + strand, within HP15_4111at 4345.539 kb on + strand, within HP15_4111at 4345.583 kb on + strand, within HP15_4111at 4345.641 kb on - strand, within HP15_4111at 4345.752 kb on + strand, within HP15_4111at 4345.790 kb on + strand, within HP15_4111at 4345.918 kb on + strand, within HP15_4111at 4345.967 kb on + strand, within HP15_4111at 4345.996 kb on + strand, within HP15_4111at 4346.051 kb on + strand, within HP15_4111at 4346.123 kb on - strand, within HP15_4111at 4346.168 kb on - strand, within HP15_4111at 4346.209 kb on + strand, within HP15_4111at 4346.285 kb on - strandat 4346.366 kb on + strandat 4346.596 kb on - strandat 4346.721 kb on - strand, within HP15_4112at 4346.795 kb on - strand, within HP15_4112at 4346.883 kb on + strand, within HP15_4112at 4346.958 kb on - strand, within HP15_4112at 4346.976 kb on - strand, within HP15_4112at 4347.007 kb on + strand, within HP15_4112at 4347.048 kb on + strand, within HP15_4112at 4347.056 kb on - strand, within HP15_4112at 4347.061 kb on - strand, within HP15_4112at 4347.099 kb on + strand, within HP15_4112at 4347.164 kb on - strand, within HP15_4112at 4347.220 kb on + strand, within HP15_4112at 4347.278 kb on - strand, within HP15_4112

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine as (N)
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4,343,938 - HP15_4110 0.67 +1.3
4,343,985 + HP15_4110 0.69 -0.1
4,344,006 + HP15_4110 0.70 +0.3
4,344,080 + HP15_4110 0.73 +0.1
4,344,108 - HP15_4110 0.74 +1.6
4,344,117 + HP15_4110 0.75 -0.1
4,344,136 + HP15_4110 0.75 +0.0
4,344,302 + HP15_4110 0.83 +0.3
4,344,370 - HP15_4110 0.86 -0.1
4,344,375 + HP15_4110 0.86 -0.2
4,344,534 - +0.1
4,344,591 + -2.4
4,344,613 - -0.3
4,344,761 - -0.7
4,345,022 - HP15_4111 0.14 -0.5
4,345,027 + HP15_4111 0.14 -0.3
4,345,109 - HP15_4111 0.20 -0.7
4,345,111 + HP15_4111 0.20 +0.9
4,345,112 - HP15_4111 0.20 -0.7
4,345,119 - HP15_4111 0.20 +0.6
4,345,121 - HP15_4111 0.20 +1.1
4,345,126 + HP15_4111 0.21 +1.1
4,345,318 - HP15_4111 0.33 +1.3
4,345,394 - HP15_4111 0.38 -1.5
4,345,394 - HP15_4111 0.38 -1.0
4,345,394 - HP15_4111 0.38 -0.3
4,345,440 - HP15_4111 0.41 -0.1
4,345,450 - HP15_4111 0.41 +0.3
4,345,499 + HP15_4111 0.44 +0.5
4,345,507 - HP15_4111 0.45 -0.4
4,345,507 - HP15_4111 0.45 +0.8
4,345,507 - HP15_4111 0.45 -0.2
4,345,529 + HP15_4111 0.46 -0.2
4,345,539 + HP15_4111 0.47 -0.1
4,345,583 + HP15_4111 0.50 -0.4
4,345,641 - HP15_4111 0.53 -1.2
4,345,752 + HP15_4111 0.60 -0.2
4,345,790 + HP15_4111 0.63 -0.1
4,345,918 + HP15_4111 0.71 -2.1
4,345,967 + HP15_4111 0.74 +0.2
4,345,996 + HP15_4111 0.76 -0.0
4,346,051 + HP15_4111 0.79 -0.9
4,346,123 - HP15_4111 0.84 +1.6
4,346,168 - HP15_4111 0.87 +0.1
4,346,209 + HP15_4111 0.89 -1.2
4,346,285 - +1.0
4,346,366 + +0.3
4,346,596 - +0.2
4,346,721 - HP15_4112 0.11 +0.1
4,346,795 - HP15_4112 0.15 +1.1
4,346,883 + HP15_4112 0.20 +1.6
4,346,958 - HP15_4112 0.24 +0.8
4,346,976 - HP15_4112 0.25 -0.0
4,347,007 + HP15_4112 0.26 -0.2
4,347,048 + HP15_4112 0.28 -0.8
4,347,056 - HP15_4112 0.29 +1.6
4,347,061 - HP15_4112 0.29 +1.1
4,347,099 + HP15_4112 0.31 +1.3
4,347,164 - HP15_4112 0.34 -0.4
4,347,220 + HP15_4112 0.37 -0.9
4,347,278 - HP15_4112 0.40 -0.0

Or see this region's nucleotide sequence