Strain Fitness in Marinobacter adhaerens HP15 around HP15_3325

Experiment: L-Glutamine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3323 and HP15_3324 are separated by 64 nucleotidesHP15_3324 and HP15_3325 are separated by 65 nucleotidesHP15_3325 and HP15_3326 are separated by 143 nucleotidesHP15_3326 and HP15_3327 are separated by 176 nucleotides HP15_3323: HP15_3323 - ribosomal protein L33, at 3,484,414 to 3,484,569 _3323 HP15_3324: HP15_3324 - endonuclease/exonuclease/phosphatase, at 3,484,634 to 3,485,494 _3324 HP15_3325: HP15_3325 - DSBA oxidoreductase, at 3,485,560 to 3,486,195 _3325 HP15_3326: HP15_3326 - cytochrome c, class I, at 3,486,339 to 3,486,947 _3326 HP15_3327: HP15_3327 - GTP-binding protein EngB, at 3,487,124 to 3,487,771 _3327 Position (kb) 3485 3486 3487Strain fitness (log2 ratio) -2 -1 0 1at 3484.640 kb on - strandat 3484.685 kb on - strandat 3484.731 kb on - strand, within HP15_3324at 3484.800 kb on + strand, within HP15_3324at 3484.920 kb on - strand, within HP15_3324at 3485.070 kb on - strand, within HP15_3324at 3485.206 kb on - strand, within HP15_3324at 3485.389 kb on - strand, within HP15_3324at 3485.461 kb on - strandat 3485.525 kb on + strandat 3485.535 kb on + strandat 3485.565 kb on - strandat 3485.777 kb on + strand, within HP15_3325at 3485.777 kb on + strand, within HP15_3325at 3485.785 kb on - strand, within HP15_3325at 3485.787 kb on - strand, within HP15_3325at 3485.818 kb on + strand, within HP15_3325at 3485.898 kb on + strand, within HP15_3325at 3486.058 kb on - strand, within HP15_3325at 3486.100 kb on + strand, within HP15_3325at 3486.136 kb on - strandat 3486.281 kb on + strandat 3486.992 kb on - strandat 3487.081 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine as (N)
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3,484,640 - +1.1
3,484,685 - -0.5
3,484,731 - HP15_3324 0.11 -0.8
3,484,800 + HP15_3324 0.19 +1.1
3,484,920 - HP15_3324 0.33 -0.7
3,485,070 - HP15_3324 0.51 +1.1
3,485,206 - HP15_3324 0.66 +1.5
3,485,389 - HP15_3324 0.88 -0.4
3,485,461 - +0.4
3,485,525 + +0.7
3,485,535 + +0.1
3,485,565 - -1.0
3,485,777 + HP15_3325 0.34 -0.6
3,485,777 + HP15_3325 0.34 -0.2
3,485,785 - HP15_3325 0.35 +1.1
3,485,787 - HP15_3325 0.36 +0.0
3,485,818 + HP15_3325 0.41 -1.1
3,485,898 + HP15_3325 0.53 +0.1
3,486,058 - HP15_3325 0.78 -0.7
3,486,100 + HP15_3325 0.85 +0.3
3,486,136 - -0.1
3,486,281 + -2.5
3,486,992 - -0.1
3,487,081 - -0.0

Or see this region's nucleotide sequence