Experiment: MoYLS4 with G418 0.031 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0932 and DvMF_0933 are separated by 2 nucleotides DvMF_0933 and DvMF_0934 are separated by 103 nucleotides DvMF_0934 and DvMF_0935 are separated by 98 nucleotides
DvMF_0932: DvMF_0932 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 1,131,176 to 1,131,763
_0932
DvMF_0933: DvMF_0933 - molybdopterin-containing oxidoreductase membrane anchor subunit (RefSeq), at 1,131,766 to 1,132,599
_0933
DvMF_0934: DvMF_0934 - Tetratricopeptide domain protein (RefSeq), at 1,132,703 to 1,133,608
_0934
DvMF_0935: DvMF_0935 - glycoside hydrolase family 57 (RefSeq), at 1,133,707 to 1,136,172
_0935
Position (kb)
1132
1133
1134 Strain fitness (log2 ratio)
-1
0
1 at 1131.756 kb on + strand at 1131.760 kb on - strand at 1131.793 kb on - strand at 1131.835 kb on - strand at 1132.115 kb on + strand, within DvMF_0933 at 1132.178 kb on + strand, within DvMF_0933 at 1132.178 kb on + strand, within DvMF_0933 at 1132.423 kb on + strand, within DvMF_0933 at 1132.431 kb on - strand, within DvMF_0933 at 1132.510 kb on - strand, within DvMF_0933 at 1132.589 kb on + strand at 1132.605 kb on + strand at 1132.694 kb on - strand at 1132.832 kb on + strand, within DvMF_0934 at 1132.849 kb on + strand, within DvMF_0934 at 1133.067 kb on - strand, within DvMF_0934 at 1133.111 kb on + strand, within DvMF_0934 at 1133.111 kb on + strand, within DvMF_0934 at 1133.111 kb on + strand, within DvMF_0934 at 1133.111 kb on + strand, within DvMF_0934 at 1133.111 kb on + strand, within DvMF_0934 at 1133.119 kb on - strand, within DvMF_0934 at 1133.135 kb on + strand, within DvMF_0934 at 1133.608 kb on - strand at 1133.608 kb on - strand at 1133.676 kb on + strand at 1133.948 kb on + strand at 1133.989 kb on - strand, within DvMF_0935 at 1134.027 kb on - strand, within DvMF_0935 at 1134.051 kb on - strand, within DvMF_0935 at 1134.090 kb on + strand, within DvMF_0935 at 1134.276 kb on + strand, within DvMF_0935 at 1134.284 kb on - strand, within DvMF_0935 at 1134.335 kb on - strand, within DvMF_0935
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with G418 0.031 mg/ml remove 1,131,756 + -0.2 1,131,760 - -0.5 1,131,793 - -0.4 1,131,835 - -0.2 1,132,115 + DvMF_0933 0.42 -0.0 1,132,178 + DvMF_0933 0.49 -0.3 1,132,178 + DvMF_0933 0.49 -0.3 1,132,423 + DvMF_0933 0.79 +0.0 1,132,431 - DvMF_0933 0.80 -0.3 1,132,510 - DvMF_0933 0.89 -0.3 1,132,589 + -0.4 1,132,605 + -1.3 1,132,694 - -0.1 1,132,832 + DvMF_0934 0.14 -0.7 1,132,849 + DvMF_0934 0.16 -0.5 1,133,067 - DvMF_0934 0.40 -0.6 1,133,111 + DvMF_0934 0.45 -0.3 1,133,111 + DvMF_0934 0.45 -0.7 1,133,111 + DvMF_0934 0.45 -0.2 1,133,111 + DvMF_0934 0.45 -0.7 1,133,111 + DvMF_0934 0.45 -0.2 1,133,119 - DvMF_0934 0.46 -0.4 1,133,135 + DvMF_0934 0.48 -0.4 1,133,608 - -0.2 1,133,608 - -0.4 1,133,676 + +0.1 1,133,948 + -0.5 1,133,989 - DvMF_0935 0.11 -0.6 1,134,027 - DvMF_0935 0.13 -0.5 1,134,051 - DvMF_0935 0.14 +0.2 1,134,090 + DvMF_0935 0.16 +0.5 1,134,276 + DvMF_0935 0.23 -0.3 1,134,284 - DvMF_0935 0.23 -0.2 1,134,335 - DvMF_0935 0.25 -0.3
Or see this region's nucleotide sequence