Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3726

Experiment: propionate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShewana3_3724 and Shewana3_3725 are separated by 241 nucleotidesShewana3_3725 and Shewana3_3726 overlap by 1 nucleotidesShewana3_3726 and Shewana3_3727 overlap by 4 nucleotides Shewana3_3724: Shewana3_3724 - arginase/agmatinase/formiminoglutamase (RefSeq), at 4,466,829 to 4,467,881 _3724 Shewana3_3725: Shewana3_3725 - demethylmenaquinone methyltransferase (RefSeq), at 4,468,123 to 4,468,878 _3725 Shewana3_3726: Shewana3_3726 - hypothetical protein (RefSeq), at 4,468,878 to 4,469,498 _3726 Shewana3_3727: Shewana3_3727 - 2-octaprenylphenol hydroxylase (RefSeq), at 4,469,495 to 4,471,144 _3727 Position (kb) 4468 4469 4470Strain fitness (log2 ratio) -1 0 1 2at 4467.947 kb on - strandat 4468.077 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction propionate (C)
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4,467,947 - +2.3
4,468,077 + -0.8

Or see this region's nucleotide sequence