Experiment: m.b. Chlorite 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2140 and Dshi_2141 are separated by 86 nucleotides Dshi_2141 and Dshi_2142 are separated by 109 nucleotides Dshi_2142 and Dshi_2143 are separated by 84 nucleotides
Dshi_2140: Dshi_2140 - sodium/hydrogen exchanger (RefSeq), at 2,269,849 to 2,271,162
_2140
Dshi_2141: Dshi_2141 - hypothetical protein (RefSeq), at 2,271,249 to 2,271,968
_2141
Dshi_2142: Dshi_2142 - ferric uptake regulator, Fur family (RefSeq), at 2,272,078 to 2,272,491
_2142
Dshi_2143: Dshi_2143 - Pirin domain protein (RefSeq), at 2,272,576 to 2,273,487
_2143
Position (kb)
2271
2272 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2270.390 kb on + strand, within Dshi_2140 at 2270.494 kb on + strand, within Dshi_2140 at 2270.494 kb on + strand, within Dshi_2140 at 2270.502 kb on - strand, within Dshi_2140 at 2270.510 kb on + strand, within Dshi_2140 at 2270.561 kb on + strand, within Dshi_2140 at 2270.582 kb on + strand, within Dshi_2140 at 2270.638 kb on + strand, within Dshi_2140 at 2270.646 kb on - strand, within Dshi_2140 at 2270.678 kb on - strand, within Dshi_2140 at 2271.068 kb on - strand at 2271.081 kb on + strand at 2271.163 kb on + strand at 2271.324 kb on + strand, within Dshi_2141 at 2271.502 kb on + strand, within Dshi_2141 at 2271.590 kb on - strand, within Dshi_2141 at 2271.766 kb on - strand, within Dshi_2141 at 2271.821 kb on + strand, within Dshi_2141 at 2271.821 kb on + strand, within Dshi_2141 at 2272.250 kb on + strand, within Dshi_2142 at 2272.252 kb on + strand, within Dshi_2142 at 2272.314 kb on + strand, within Dshi_2142 at 2272.509 kb on - strand at 2272.647 kb on - strand at 2272.728 kb on - strand, within Dshi_2143 at 2272.738 kb on + strand, within Dshi_2143 at 2272.792 kb on + strand, within Dshi_2143 at 2272.959 kb on + strand, within Dshi_2143
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.5 mM remove 2,270,390 + Dshi_2140 0.41 +0.1 2,270,494 + Dshi_2140 0.49 -0.2 2,270,494 + Dshi_2140 0.49 -1.4 2,270,502 - Dshi_2140 0.50 -0.1 2,270,510 + Dshi_2140 0.50 -2.5 2,270,561 + Dshi_2140 0.54 +1.4 2,270,582 + Dshi_2140 0.56 -0.2 2,270,638 + Dshi_2140 0.60 -0.2 2,270,646 - Dshi_2140 0.61 -0.4 2,270,678 - Dshi_2140 0.63 +0.2 2,271,068 - -0.2 2,271,081 + -0.2 2,271,163 + +1.8 2,271,324 + Dshi_2141 0.10 +0.9 2,271,502 + Dshi_2141 0.35 -1.8 2,271,590 - Dshi_2141 0.47 +0.1 2,271,766 - Dshi_2141 0.72 +0.8 2,271,821 + Dshi_2141 0.79 +0.3 2,271,821 + Dshi_2141 0.79 +1.0 2,272,250 + Dshi_2142 0.42 -1.4 2,272,252 + Dshi_2142 0.42 -0.3 2,272,314 + Dshi_2142 0.57 -1.2 2,272,509 - -1.4 2,272,647 - +1.2 2,272,728 - Dshi_2143 0.17 +2.4 2,272,738 + Dshi_2143 0.18 -1.5 2,272,792 + Dshi_2143 0.24 +2.2 2,272,959 + Dshi_2143 0.42 -2.8
Or see this region's nucleotide sequence