Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0989

Experiment: m.b. Chlorite 0.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chlorite 0.5 mM
1,007,337	+		Dshi_0988	0.25	-1.2
1,007,356	-		Dshi_0988	0.27	-0.4
1,007,391	+		Dshi_0988	0.30	-0.5
1,007,419	+		Dshi_0988	0.33	+2.4
1,007,437	-		Dshi_0988	0.34	+0.4
1,007,462	+		Dshi_0988	0.36	-0.9
1,007,467	+		Dshi_0988	0.37	-0.5
1,007,475	-		Dshi_0988	0.38	-0.1
1,007,495	-		Dshi_0988	0.39	-1.4
1,007,546	-		Dshi_0988	0.44	-0.2
1,007,571	-		Dshi_0988	0.46	+0.4
1,007,592	-		Dshi_0988	0.48	+0.0
1,007,659	-		Dshi_0988	0.54	-0.3
1,007,673	+		Dshi_0988	0.55	+2.0
1,007,673	+		Dshi_0988	0.55	-1.9
1,007,673	+		Dshi_0988	0.55	+0.8
1,007,681	-		Dshi_0988	0.56	+0.3
1,007,681	-		Dshi_0988	0.56	+3.4
1,007,727	+		Dshi_0988	0.60	-2.5
1,007,749	+		Dshi_0988	0.62	-0.9
1,007,749	+		Dshi_0988	0.62	-1.2
1,007,843	+		Dshi_0988	0.71	-0.9
1,007,939	+		Dshi_0988	0.79	+0.9
1,007,951	-		Dshi_0988	0.80	+1.3
1,008,005	+		Dshi_0988	0.85	-0.5
1,008,035	-		Dshi_0988	0.88	+1.1
1,008,154	+				-3.0
1,008,209	+				-1.7
1,008,230	+		Dshi_0989	0.15	+0.1
1,008,348	+		Dshi_0989	0.64	+1.3
1,008,361	-		Dshi_0989	0.69	-3.2
1,008,378	-		Dshi_0989	0.76	+1.6
1,008,395	+		Dshi_0989	0.83	+2.1
1,008,431	-				+0.1
1,008,435	+				+0.1
1,008,435	+				-0.6
1,008,442	+				-0.8
1,008,459	+				+1.1
1,008,459	+				+0.1
1,008,465	+				+0.8
1,008,467	-				+0.9
1,008,467	-				-0.1
1,008,467	-				-0.0
1,008,486	+				+0.2
1,008,486	-				+0.3
1,008,493	+				+0.4
1,008,501	-				-0.5
1,008,501	-				+0.0
1,008,507	+				+0.7
1,008,507	+				+0.1
1,008,507	+				+0.3
1,008,507	+				+0.4
1,008,507	+				+0.4
1,008,512	+				-1.1
1,008,512	+				+0.6
1,008,512	+				+0.4
1,008,513	+				-0.7
1,008,515	-				+0.5
1,008,515	-				+2.9
1,008,515	-				-0.7
1,008,515	-				-0.8
1,008,515	-				+1.1
1,008,515	-				+0.7
1,008,515	-				+1.8
1,008,515	-				-1.2
1,008,515	-				-0.5
1,008,515	-				-0.1
1,008,515	-				+0.2
1,008,515	-				+1.9
1,008,515	-				-0.3
1,008,515	-				+0.2
1,008,520	-				+0.1
1,008,523	+				-2.4
1,008,523	+				-0.3
1,008,563	+				+1.2
1,008,565	+				-0.6
1,008,579	-				-0.6
1,008,609	-				-1.3
1,008,660	+				+0.5
1,008,667	+				+0.3
1,008,668	-				+0.1
1,008,707	+				-0.5
1,008,709	+				-0.3
1,008,709	+				+0.2
1,008,709	+				-0.2
1,008,715	-				-0.3
1,008,715	-				+0.8
1,008,729	-				+0.4
1,008,740	-				-0.6
1,008,748	+				+0.3
1,008,750	+				-0.0
1,008,753	-				-0.5
1,008,772	+				+1.3
1,008,779	-				+0.0
1,008,787	+				-0.1
1,008,787	+				+0.1
1,008,795	-				-0.7
1,008,795	-				-3.0
1,008,795	-				-0.5
1,008,797	+				+1.0
1,008,797	+				+0.5
1,008,797	+				+2.1
1,008,797	+				+1.6
1,008,797	+				+0.5
1,008,797	+				-0.8
1,008,797	+				+1.2
1,008,797	+				-1.4
1,008,800	+				-0.4
1,008,800	+				+1.2
1,008,805	-				-0.6
1,008,805	-				-0.6
1,008,805	-				-2.5
1,008,805	-				-3.0
1,008,808	-				-1.0
1,008,808	-				-0.5
1,008,808	-				+0.3
1,008,808	-				+0.7
1,008,808	-				-1.6
1,008,808	-				+1.3
1,008,813	+				-0.5
1,008,818	+				-1.2
1,008,818	-				+0.4
1,008,821	-				+0.6
1,008,821	-				+2.0
1,008,821	-				-1.3
1,008,823	+				+0.2
1,008,823	+				-0.6
1,008,823	+				+0.2
1,008,823	+				+2.3
1,008,823	+				+1.0
1,008,823	+				-0.6
1,008,825	+				-0.2
1,008,825	+				-0.5
1,008,831	-				+0.1
1,008,831	-				+0.1
1,008,831	-				+0.6
1,008,831	-				+0.9
1,008,833	-				+2.9
1,008,833	-				+1.0
1,008,835	+				-0.3
1,008,835	+				+1.4
1,008,835	+				-0.9
1,008,835	+				+0.9
1,008,835	+				+3.1
1,008,835	+				+1.9
1,008,835	+				-0.4
1,008,835	+				+0.6
1,008,835	+				-0.5
1,008,835	+				-1.4
1,008,835	+				+1.0
1,008,835	+				-0.5
1,008,835	+				-1.4
1,008,835	+				-0.1
1,008,835	+				+0.9
1,008,835	+				-1.7
1,008,835	+				-0.6
1,008,835	+				+0.7
1,008,835	+				-0.9
1,008,835	+				+0.4
1,008,837	+				+0.0
1,008,843	-				-1.1
1,008,843	-				-0.8
1,008,843	-				+1.5
1,008,843	-				+1.8
1,008,843	-				+0.6
1,008,843	-				-1.0
1,008,843	-				+0.8
1,008,843	-				-0.4
1,008,843	-				-0.0
1,008,843	-				-0.5
1,008,843	-				-0.1
1,008,843	-				+1.4
1,008,843	-				-0.4
1,008,843	-				-1.0
1,008,843	-				-0.3
1,008,843	-				+0.4
1,008,843	-				-0.2
1,008,843	-				+0.1
1,008,843	-				-0.3
1,008,843	-				-0.9
1,008,859	+				-0.7
1,008,909	+				-0.1
1,008,927	-				+0.4
1,008,927	-				+2.4
1,008,944	-				-0.9
1,008,944	-				+1.0
1,008,945	-				-0.5
1,008,945	-				+2.1
1,008,945	-				+1.6
1,008,957	-				+0.3
1,008,957	-				+1.3
1,008,960	+				-0.7
1,008,970	-				+0.3
1,008,977	+				-0.7
1,008,977	+				-0.3
1,008,982	+				+1.5
1,008,982	+				+4.4
1,008,982	+				+1.9
1,008,985	-				+0.7
1,008,990	-				-0.1
1,009,014	-				-0.3
1,009,018	+				-0.5
1,009,024	-				+1.7
1,009,030	-				+0.6
1,009,064	+				+0.6
1,009,064	+				-0.5
1,009,064	+				-0.3
1,009,064	+				-0.4
1,009,072	-				+4.3
1,009,072	-				+0.4
1,009,072	-				+0.1
1,009,072	-				-0.2
1,009,079	+				-0.4
1,009,079	+				+0.7
1,009,086	-				-1.5
1,009,090	-				+1.0
1,009,114	+				-0.8
1,009,122	+				+1.4
1,009,136	+				-0.7
1,009,136	+				+0.6
1,009,136	+				-0.7
1,009,136	+				-0.6
1,009,136	+				+0.1
1,009,136	+				-0.4
1,009,136	+				-0.2
1,009,136	+				+0.4
1,009,136	+				+0.3
1,009,136	+				-1.5
1,009,136	+				+0.2
1,009,136	+				-0.4
1,009,144	-				+0.2
1,009,144	-				-0.3
1,009,144	-				+0.8
1,009,144	-				-0.7
1,009,144	-				-0.1
1,009,144	-				+2.1
1,009,144	-				-0.5
1,009,144	-				-3.6
1,009,144	-				-1.1
1,009,144	-				-0.2
1,009,144	-				-0.2
1,009,144	-				-0.1
1,009,144	-				+1.6
1,009,144	-				-0.0
1,009,144	-				+2.9
1,009,144	-				-0.2
1,009,144	-				+1.7
1,009,144	-				-0.3
1,009,144	-				-1.0
1,009,144	-				+1.0
1,009,144	-				-0.0
1,009,144	-				+0.1
1,009,151	+				+1.0
1,009,155	+				-0.1
1,009,155	+				-0.3
1,009,174	-				+1.3
1,009,200	-				+0.9
1,009,204	+				-0.4
1,009,238	+				+1.3
1,009,246	-				+1.6
1,009,246	-				-4.1
1,009,249	+				-0.9
1,009,258	+				-0.0
1,009,262	-				+0.4
1,009,268	+				-0.1
1,009,269	-				-1.2
1,009,281	-				+0.1
1,009,283	+				-0.8
1,009,293	+				+0.8
1,009,293	+				+0.3
1,009,297	+				-1.3
1,009,297	+				-0.5
1,009,297	+				-0.4
1,009,297	-				+0.2
1,009,301	-				+3.0
1,009,303	+				+3.6
1,009,312	-				+1.0
1,009,328	+				+1.1
1,009,328	+				-0.7
1,009,328	+				+1.3
1,009,336	-				+0.3
1,009,336	-				-0.1
1,009,351	+				-1.1
1,009,370	-				+1.3
1,009,379	-				+0.2
1,009,393	-				-0.3
1,009,395	+				-1.3
1,009,403	-				-0.0
1,009,403	-				+0.4
1,009,409	+				+0.4
1,009,417	+				+0.4
1,009,417	+				-0.8
1,009,417	+				+2.3
1,009,425	-				+0.1
1,009,427	+				+0.8
1,009,432	+				-0.1