Strain Fitness in Shewanella loihica PV-4 around Shew_3814

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
4,541,626	+		Shew_3812	0.72	-0.3
4,541,633	+		Shew_3812	0.73	-0.2
4,541,633	+		Shew_3812	0.73	+0.6
4,541,633	+		Shew_3812	0.73	+1.0
4,541,633	+		Shew_3812	0.73	-0.3
4,541,641	-		Shew_3812	0.73	-0.2
4,541,647	-		Shew_3812	0.74	+0.4
4,541,654	+		Shew_3812	0.74	+2.0
4,541,654	+		Shew_3812	0.74	-0.3
4,541,654	+		Shew_3812	0.74	+0.9
4,541,654	+		Shew_3812	0.74	-0.3
4,541,654	+		Shew_3812	0.74	+0.9
4,541,654	+		Shew_3812	0.74	-3.2
4,541,654	+		Shew_3812	0.74	-0.3
4,541,654	+		Shew_3812	0.74	-1.2
4,541,654	+		Shew_3812	0.74	-3.0
4,541,654	+		Shew_3812	0.74	-0.2
4,541,654	+		Shew_3812	0.74	-0.6
4,541,654	+		Shew_3812	0.74	-0.3
4,541,654	+		Shew_3812	0.74	+0.0
4,541,654	+		Shew_3812	0.74	-0.3
4,541,654	+		Shew_3812	0.74	+0.6
4,541,654	+		Shew_3812	0.74	-0.6
4,541,654	+		Shew_3812	0.74	-0.2
4,541,654	+		Shew_3812	0.74	-0.2
4,541,654	+		Shew_3812	0.74	-0.3
4,541,654	+		Shew_3812	0.74	+0.2
4,541,654	+		Shew_3812	0.74	-0.3
4,541,654	+		Shew_3812	0.74	+0.6
4,541,654	+		Shew_3812	0.74	-0.7
4,541,654	+		Shew_3812	0.74	+0.0
4,541,654	+		Shew_3812	0.74	+1.2
4,541,654	+		Shew_3812	0.74	+1.0
4,541,654	+		Shew_3812	0.74	-0.7
4,541,654	+		Shew_3812	0.74	-0.2
4,541,654	+		Shew_3812	0.74	+1.4
4,541,654	+		Shew_3812	0.74	+0.2
4,541,654	+		Shew_3812	0.74	+0.3
4,541,654	+		Shew_3812	0.74	-1.2
4,541,654	+		Shew_3812	0.74	-0.3
4,541,654	+		Shew_3812	0.74	-0.4
4,541,654	+		Shew_3812	0.74	-0.8
4,541,654	+		Shew_3812	0.74	-0.6
4,541,654	+		Shew_3812	0.74	-0.4
4,541,654	+		Shew_3812	0.74	-0.2
4,541,654	+		Shew_3812	0.74	+0.1
4,541,654	+		Shew_3812	0.74	-0.5
4,541,654	+		Shew_3812	0.74	-0.2
4,541,654	+		Shew_3812	0.74	+1.7
4,541,654	+		Shew_3812	0.74	-1.2
4,541,659	+		Shew_3812	0.75	+1.9
4,541,659	+		Shew_3812	0.75	-0.0
4,541,661	-		Shew_3812	0.75	-0.4
4,541,662	-		Shew_3812	0.75	+0.5
4,541,662	-		Shew_3812	0.75	-0.5
4,541,662	-		Shew_3812	0.75	-0.3
4,541,662	-		Shew_3812	0.75	-0.4
4,541,662	-		Shew_3812	0.75	+0.2
4,541,662	-		Shew_3812	0.75	-0.6
4,541,662	-		Shew_3812	0.75	+0.0
4,541,662	-		Shew_3812	0.75	+0.0
4,541,662	-		Shew_3812	0.75	+0.3
4,541,662	-		Shew_3812	0.75	-0.5
4,541,662	-		Shew_3812	0.75	-0.8
4,541,662	-		Shew_3812	0.75	-0.7
4,541,662	-		Shew_3812	0.75	-0.2
4,541,662	-		Shew_3812	0.75	-2.0
4,541,662	-		Shew_3812	0.75	-2.0
4,541,662	-		Shew_3812	0.75	-0.0
4,541,662	-		Shew_3812	0.75	-0.7
4,541,662	-		Shew_3812	0.75	+0.2
4,541,662	-		Shew_3812	0.75	-0.3
4,541,662	-		Shew_3812	0.75	-0.0
4,541,662	-		Shew_3812	0.75	+0.3
4,541,662	-		Shew_3812	0.75	-0.4
4,541,662	-		Shew_3812	0.75	+0.1
4,541,662	-		Shew_3812	0.75	+0.3
4,541,662	-		Shew_3812	0.75	-0.1
4,541,662	-		Shew_3812	0.75	-0.3
4,541,662	-		Shew_3812	0.75	-1.5
4,541,662	-		Shew_3812	0.75	+1.0
4,541,662	-		Shew_3812	0.75	+0.5
4,541,664	+		Shew_3812	0.75	-0.3
4,541,672	-		Shew_3812	0.75	+0.1
4,541,672	-		Shew_3812	0.75	-0.1
4,541,683	-		Shew_3812	0.76	-0.0
4,541,737	+		Shew_3812	0.80	-1.2
4,541,743	+		Shew_3812	0.80	-0.3
4,541,743	+		Shew_3812	0.80	-0.4
4,541,745	-		Shew_3812	0.81	-0.2
4,541,745	-		Shew_3812	0.81	-0.2
4,541,746	-		Shew_3812	0.81	-0.2
4,541,746	-		Shew_3812	0.81	+0.3
4,541,746	-		Shew_3812	0.81	-0.4
4,541,752	+		Shew_3812	0.81	-0.1
4,541,758	+		Shew_3812	0.81	+0.3
4,541,794	+		Shew_3812	0.84	+0.2
4,541,794	+		Shew_3812	0.84	-1.5
4,541,794	+		Shew_3812	0.84	-1.6
4,541,794	+		Shew_3812	0.84	+0.7
4,541,794	+		Shew_3812	0.84	-0.4
4,541,794	+		Shew_3812	0.84	-0.7
4,541,794	+		Shew_3812	0.84	-3.3
4,541,794	+		Shew_3812	0.84	+1.1
4,541,802	-		Shew_3812	0.85	-0.4
4,541,802	-		Shew_3812	0.85	-0.3
4,541,820	+		Shew_3812	0.86	-0.2
4,541,870	-		Shew_3812	0.89	-0.3
4,541,946	+				+0.6
4,541,946	+				+0.4
4,541,946	+				+0.6
4,541,954	-				-0.2
4,541,954	-				-0.3
4,541,954	-				-0.3
4,541,954	-				+1.0
4,541,970	+				-0.3
4,541,985	+				-0.9
4,541,985	+				-0.2
4,541,985	+				-1.8
4,541,985	+				+0.9
4,541,985	+				-0.1
4,541,985	+				-0.4
4,541,988	-				+0.0
4,541,991	+				+0.3
4,541,993	-				+0.1
4,542,031	+				-0.5
4,542,039	-				+0.1
4,542,039	+				+0.4
4,542,039	-				-0.3
4,542,147	-		Shew_3813	0.10	+0.3
4,542,160	-		Shew_3813	0.14	+0.6
4,542,162	-		Shew_3813	0.14	-0.5
4,542,174	+		Shew_3813	0.18	+0.5
4,542,287	+		Shew_3813	0.50	+0.3
4,542,295	-		Shew_3813	0.52	+0.2
4,542,332	-		Shew_3813	0.62	+0.5
4,542,409	+		Shew_3813	0.84	+1.0
4,542,478	+				+0.3
4,542,502	+				+0.2
4,542,502	+				+1.1
4,542,569	+				-0.4
4,542,674	-				+0.5
4,542,678	+		Shew_3814	0.10	+0.2
4,542,679	+		Shew_3814	0.10	+0.6
4,542,790	+		Shew_3814	0.23	+0.5
4,542,798	-		Shew_3814	0.23	+0.7
4,542,798	-		Shew_3814	0.23	+0.7
4,542,800	+		Shew_3814	0.24	+0.7
4,542,843	-		Shew_3814	0.28	+1.0
4,542,958	+		Shew_3814	0.41	+1.5
4,543,036	-		Shew_3814	0.50	+0.2
4,543,052	+		Shew_3814	0.52	+0.5
4,543,131	-		Shew_3814	0.60	+0.6
4,543,131	-		Shew_3814	0.60	+0.5
4,543,131	-		Shew_3814	0.60	+0.8
4,543,131	-		Shew_3814	0.60	+0.8
4,543,156	+		Shew_3814	0.63	+0.8
4,543,278	-		Shew_3814	0.77	+0.4
4,543,649	-				+0.1
4,543,747	-		Shew_3815	0.12	+0.5
4,543,747	+		Shew_3815	0.12	+1.1
4,543,755	-		Shew_3815	0.17	+0.2
4,543,755	-		Shew_3815	0.17	+1.1
4,543,801	+		Shew_3815	0.41	+0.5
4,543,814	+		Shew_3815	0.47	-0.6
4,543,841	+		Shew_3815	0.61	-0.1
4,543,911	-				+1.1
4,544,183	-		Shew_3816	0.14	-0.4
4,544,403	-		Shew_3816	0.55	-0.3
4,544,408	-		Shew_3816	0.55	-1.1
4,544,413	-		Shew_3816	0.56	+0.0