Strain Fitness in Shewanella loihica PV-4 around Shew_3711

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
4,415,262	-	tdh	Shew_3710	0.31	+1.0
4,415,451	+	tdh	Shew_3710	0.50	+1.1
4,415,648	+	tdh	Shew_3710	0.69	+1.3
4,415,674	+	tdh	Shew_3710	0.72	+1.5
4,415,733	-	tdh	Shew_3710	0.77	+1.2
4,415,968	-				+0.8
4,416,299	+		Shew_3711	0.80	+0.9
4,416,332	+				+0.1
4,416,421	-				+1.1
4,416,433	+				-0.8
4,416,571	+		Shew_3712	0.23	+0.1
4,416,788	+		Shew_3712	0.49	+0.4
4,416,902	-		Shew_3712	0.63	+1.2
4,416,949	-		Shew_3712	0.68	-0.1
4,417,036	+		Shew_3712	0.79	-0.2
4,417,161	+				-0.0
4,417,169	-				+0.4
4,417,178	+				+0.6
4,417,205	-				+0.7
4,417,359	+				-0.3