Strain Fitness in Shewanella loihica PV-4 around Shew_3599

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
4,295,519	-				-0.2
4,295,827	-				-0.9
4,295,957	+		Shew_3598	0.34	+1.0
4,296,416	-				-0.3
4,296,533	+		Shew_3599	0.11	+0.6
4,296,551	-		Shew_3599	0.12	+0.4
4,296,619	+		Shew_3599	0.16	+0.7
4,296,827	-		Shew_3599	0.29	+0.6
4,296,845	-		Shew_3599	0.30	+0.2
4,296,895	+		Shew_3599	0.33	+0.7
4,296,971	-		Shew_3599	0.37	+0.8
4,297,184	-		Shew_3599	0.50	+0.9
4,297,215	-		Shew_3599	0.51	+0.9
4,297,369	-		Shew_3599	0.60	+0.5
4,297,486	-		Shew_3599	0.67	+0.9
4,297,762	+		Shew_3599	0.83	+0.6
4,297,843	-		Shew_3599	0.88	+3.2
4,297,858	+		Shew_3599	0.89	+0.5
4,297,938	-				+1.3
4,297,942	+				+1.5
4,298,650	-		Shew_3600	0.76	+0.5
4,298,727	-		Shew_3600	0.86	+1.5