Strain Fitness in Shewanella loihica PV-4 around Shew_3289

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
3,930,843	+				+0.6
3,931,014	-		Shew_3288	0.23	+0.4
3,931,021	+		Shew_3288	0.24	-0.4
3,931,029	-		Shew_3288	0.26	+0.3
3,931,122	-		Shew_3288	0.38	+0.4
3,931,348	+		Shew_3288	0.69	-0.3
3,931,356	-		Shew_3288	0.70	+0.5
3,931,536	+				+1.0
3,932,112	-		Shew_3289	0.21	+0.2
3,932,114	+		Shew_3289	0.21	-2.0
3,932,713	+		Shew_3289	0.45	+0.6
3,932,713	+		Shew_3289	0.45	+1.9
3,932,713	+		Shew_3289	0.45	+1.4
3,932,875	+		Shew_3289	0.52	-0.3
3,933,433	-		Shew_3289	0.74	+0.7
3,933,820	+		Shew_3289	0.90	+1.4
3,934,097	+				+0.6
3,934,289	+		Shew_3290	0.24	+0.2
3,934,601	+		Shew_3290	0.69	+0.1
3,934,665	-		Shew_3290	0.78	-0.6
3,934,900	-				+0.1
3,934,902	+				+1.0
3,935,030	-				-0.1
3,935,030	-				-0.1