Strain Fitness in Shewanella loihica PV-4 around Shew_3220

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
3,843,304	-				-0.2
3,843,325	-				+0.1
3,843,383	+				-2.3
3,843,656	-		Shew_3220	0.41	+1.9
3,843,819	-		Shew_3220	0.61	-0.1
3,843,866	-		Shew_3220	0.67	-0.2
3,844,068	-				-0.8
3,844,092	+				+0.1
3,844,147	+				+0.0
3,844,169	+				+0.2
3,844,177	-				+0.2
3,844,189	-				+0.2
3,844,241	+				-0.3
3,844,249	-				-1.8
3,844,414	+				-0.1
3,844,501	-				+0.3
3,844,501	-				+0.2
3,844,501	-				+0.5
3,844,505	+				-0.2
3,844,505	+				-0.1
3,844,610	-				+0.1
3,844,628	+				+0.3
3,844,854	-		Shew_3221	0.27	-0.2
3,844,894	+		Shew_3221	0.30	-0.0
3,845,024	-		Shew_3221	0.42	+0.2
3,845,087	+		Shew_3221	0.47	-1.7