Strain Fitness in Shewanella loihica PV-4 around Shew_3216

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
3,835,185	+		Shew_3215	0.89	-0.2
3,835,436	-				+0.1
3,835,558	-		Shew_3216	0.13	+0.4
3,835,668	-		Shew_3216	0.26	-0.5
3,835,854	+		Shew_3216	0.46	+0.4
3,836,042	+		Shew_3216	0.67	-0.1
3,836,068	+		Shew_3216	0.70	-1.2
3,836,089	+		Shew_3216	0.72	-0.3
3,836,097	-		Shew_3216	0.73	-0.2
3,836,360	-				+0.2
3,836,418	-				+0.1
3,836,840	+		Shew_3217	0.34	+0.7
3,836,967	-		Shew_3217	0.45	-2.6
3,837,049	+		Shew_3217	0.52	+0.1
3,837,182	-		Shew_3217	0.63	-1.2