Strain Fitness in Shewanella loihica PV-4 around Shew_3211

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
3,828,642	+				-0.8
3,828,833	+		Shew_3210	0.37	-0.1
3,828,911	-		Shew_3210	0.64	+0.1
3,829,017	+				-0.0
3,829,270	+		Shew_3211	0.34	+0.3
3,829,527	-		Shew_3211	0.77	+0.5
3,829,586	+		Shew_3211	0.87	+1.1
3,829,624	-				+1.2
3,829,672	+				+0.3
3,829,672	+				+0.3
3,829,966	-		Shew_3212	0.47	+0.2
3,830,047	-		Shew_3212	0.64	-0.3
3,830,054	+		Shew_3212	0.65	+0.2
3,830,054	+		Shew_3212	0.65	-0.8
3,830,116	+		Shew_3212	0.78	+0.5
3,830,173	-		Shew_3212	0.89	-0.1
3,830,190	-				-0.1
3,830,234	+				+0.2
3,830,242	-				-0.3
3,830,313	-				+0.9
3,830,325	-				-0.1
3,830,363	+				+0.2
3,830,365	+				+0.2
3,830,402	-				+0.1
3,830,452	-				-0.6
3,830,569	+				-3.0
3,830,589	+				+0.4