Strain Fitness in Shewanella loihica PV-4 around Shew_2989

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
3,547,352	+				-0.4
3,547,391	+		Shew_2988	0.12	+0.4
3,547,451	+		Shew_2988	0.20	+0.0
3,547,451	+		Shew_2988	0.20	-0.6
3,547,762	+		Shew_2988	0.63	+0.6
3,548,540	+		Shew_2989	0.44	-0.5
3,548,540	+		Shew_2989	0.44	-1.0
3,548,623	-		Shew_2989	0.57	+0.4
3,548,921	-				+0.3
3,549,194	+		Shew_2990	0.11	+0.0
3,549,209	+		Shew_2990	0.12	+0.1
3,549,300	-		Shew_2990	0.16	-0.1
3,549,402	+		Shew_2990	0.22	+0.5
3,549,869	+		Shew_2990	0.45	-0.5