Strain Fitness in Shewanella loihica PV-4 around Shew_2673

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
3,162,534	+				-0.2
3,162,729	-				-0.5
3,162,933	-		Shew_2672	0.35	+0.1
3,163,586	+				-0.4
3,163,594	-				-1.3
3,163,846	+	caiC	Shew_2673	0.22	-0.4
3,163,878	+	caiC	Shew_2673	0.24	-0.2
3,163,926	-	caiC	Shew_2673	0.27	-0.4
3,164,199	+	caiC	Shew_2673	0.45	-0.1
3,164,413	+	caiC	Shew_2673	0.58	+0.1
3,164,731	+	caiC	Shew_2673	0.79	-0.6
3,164,747	+	caiC	Shew_2673	0.80	+0.5
3,164,755	-	caiC	Shew_2673	0.80	+2.8
3,164,856	-	caiC	Shew_2673	0.87	-1.0
3,165,410	+		Shew_2674	0.28	+0.2
3,165,418	-		Shew_2674	0.29	+0.7
3,165,534	+		Shew_2674	0.38	-0.1
3,165,534	+		Shew_2674	0.38	-0.9
3,165,578	-		Shew_2674	0.42	-0.1
3,165,662	+		Shew_2674	0.48	-0.4
3,165,687	-		Shew_2674	0.50	-0.2
3,165,862	-		Shew_2674	0.65	+0.0
3,165,940	+		Shew_2674	0.71	+0.5
3,165,948	-		Shew_2674	0.72	+0.0
3,165,948	-		Shew_2674	0.72	-0.7
3,165,948	-		Shew_2674	0.72	-1.4
3,165,953	-		Shew_2674	0.72	-0.3
3,165,994	-		Shew_2674	0.75	+0.1