Experiment: defined media with 40 mM sodium acetate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3251 and Dsui_3252 are separated by 48 nucleotides Dsui_3252 and Dsui_3253 are separated by 290 nucleotides Dsui_3253 and Dsui_3254 are separated by 146 nucleotides Dsui_3254 and Dsui_3255 are separated by 171 nucleotides
Dsui_3251: Dsui_3251 - ATPase involved in chromosome partitioning, at 3,492,166 to 3,492,930
_3251
Dsui_3252: Dsui_3252 - hypothetical protein, at 3,492,979 to 3,493,197
_3252
Dsui_3253: Dsui_3253 - Protein of unknown function (DUF3579), at 3,493,488 to 3,493,781
_3253
Dsui_3254: Dsui_3254 - ribosomal protein S20, at 3,493,928 to 3,494,194
_3254
Dsui_3255: Dsui_3255 - integral membrane protein MviN, at 3,494,366 to 3,495,910
_3255
Position (kb)
3493
3494
3495 Strain fitness (log2 ratio)
-1
0
1 at 3492.958 kb on + strand at 3493.005 kb on + strand, within Dsui_3252 at 3493.005 kb on + strand, within Dsui_3252 at 3493.013 kb on - strand, within Dsui_3252 at 3493.024 kb on - strand, within Dsui_3252 at 3493.050 kb on + strand, within Dsui_3252 at 3493.086 kb on + strand, within Dsui_3252 at 3493.103 kb on - strand, within Dsui_3252 at 3493.105 kb on - strand, within Dsui_3252 at 3493.105 kb on - strand, within Dsui_3252 at 3493.105 kb on - strand, within Dsui_3252 at 3493.123 kb on + strand, within Dsui_3252 at 3493.145 kb on - strand, within Dsui_3252 at 3493.252 kb on - strand at 3493.262 kb on - strand at 3493.267 kb on + strand at 3493.381 kb on + strand at 3493.433 kb on - strand at 3493.440 kb on + strand at 3493.443 kb on - strand at 3493.492 kb on - strand at 3493.596 kb on - strand, within Dsui_3253 at 3493.637 kb on + strand, within Dsui_3253 at 3493.691 kb on + strand, within Dsui_3253 at 3493.691 kb on + strand, within Dsui_3253 at 3493.712 kb on - strand, within Dsui_3253 at 3493.799 kb on + strand at 3493.838 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction defined media with 40 mM sodium acetate remove 3,492,958 + +0.1 3,493,005 + Dsui_3252 0.12 -0.6 3,493,005 + Dsui_3252 0.12 -0.1 3,493,013 - Dsui_3252 0.16 +0.0 3,493,024 - Dsui_3252 0.21 +0.0 3,493,050 + Dsui_3252 0.32 -0.2 3,493,086 + Dsui_3252 0.49 -1.4 3,493,103 - Dsui_3252 0.57 -0.2 3,493,105 - Dsui_3252 0.58 -0.2 3,493,105 - Dsui_3252 0.58 +0.7 3,493,105 - Dsui_3252 0.58 -0.5 3,493,123 + Dsui_3252 0.66 +0.2 3,493,145 - Dsui_3252 0.76 -0.0 3,493,252 - -0.2 3,493,262 - -1.1 3,493,267 + +0.9 3,493,381 + +0.1 3,493,433 - +0.9 3,493,440 + -0.0 3,493,443 - -0.3 3,493,492 - +0.3 3,493,596 - Dsui_3253 0.37 -0.8 3,493,637 + Dsui_3253 0.51 -1.3 3,493,691 + Dsui_3253 0.69 -1.5 3,493,691 + Dsui_3253 0.69 -1.1 3,493,712 - Dsui_3253 0.76 -1.3 3,493,799 + +0.1 3,493,838 - -0.6
Or see this region's nucleotide sequence