Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2970
Experiment: MoYLS4 with Carbenicillin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Carbenicillin 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,744,939 | + | DvMF_2969 | 0.29 | +1.7 | |
3,744,992 | - | DvMF_2969 | 0.34 | -0.4 | |
3,744,992 | - | DvMF_2969 | 0.34 | -0.1 | |
3,745,136 | + | DvMF_2969 | 0.45 | -1.4 | |
3,745,502 | + | DvMF_2969 | 0.74 | -0.7 | |
3,745,640 | + | DvMF_2969 | 0.85 | -0.5 | |
3,745,954 | + | DvMF_2970 | 0.14 | -0.2 | |
3,745,974 | - | DvMF_2970 | 0.17 | -0.3 | |
3,746,035 | - | DvMF_2970 | 0.23 | -0.3 | |
3,746,037 | + | DvMF_2970 | 0.24 | -0.4 | |
3,746,114 | - | DvMF_2970 | 0.32 | -0.4 | |
3,746,344 | + | DvMF_2970 | 0.58 | -0.1 | |
3,746,360 | - | DvMF_2970 | 0.59 | +1.8 | |
3,746,362 | + | DvMF_2970 | 0.59 | -0.0 | |
3,746,397 | + | DvMF_2970 | 0.63 | +0.0 | |
3,746,444 | - | DvMF_2970 | 0.69 | -0.2 | |
3,746,644 | - | -0.1 | |||
3,746,715 | + | -0.1 | |||
3,747,225 | + | DvMF_2971 | 0.58 | +0.0 | |
3,747,281 | + | DvMF_2971 | 0.65 | -0.1 | |
3,747,281 | + | DvMF_2971 | 0.65 | -0.0 | |
3,747,408 | + | DvMF_2971 | 0.79 | -0.3 | |
3,747,416 | - | DvMF_2971 | 0.80 | -0.1 | |
3,747,482 | + | DvMF_2971 | 0.88 | -0.3 | |
3,747,642 | - | -0.5 |
Or see this region's nucleotide sequence