Experiment: MoYLS4 with Carbenicillin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2968 and DvMF_2969 are separated by 318 nucleotides DvMF_2969 and DvMF_2970 overlap by 4 nucleotides DvMF_2970 and DvMF_2971 overlap by 4 nucleotides
DvMF_2968: DvMF_2968 - extracellular solute-binding protein family 1 (RefSeq), at 3,743,181 to 3,744,251
_2968
DvMF_2969: DvMF_2969 - ABC transporter related (RefSeq), at 3,744,570 to 3,745,826
_2969
DvMF_2970: DvMF_2970 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 3,745,823 to 3,746,728
_2970
DvMF_2971: DvMF_2971 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 3,746,725 to 3,747,585
_2971
Position (kb)
3744
3745
3746 Strain fitness (log2 ratio)
-1
0
1
2 at 3743.622 kb on + strand, within DvMF_2968 at 3743.728 kb on + strand, within DvMF_2968 at 3744.104 kb on - strand, within DvMF_2968 at 3744.555 kb on + strand at 3744.566 kb on - strand at 3744.679 kb on - strand at 3744.731 kb on - strand, within DvMF_2969 at 3744.804 kb on - strand, within DvMF_2969 at 3744.939 kb on + strand, within DvMF_2969 at 3744.992 kb on - strand, within DvMF_2969 at 3744.992 kb on - strand, within DvMF_2969 at 3745.136 kb on + strand, within DvMF_2969 at 3745.502 kb on + strand, within DvMF_2969 at 3745.640 kb on + strand, within DvMF_2969 at 3745.954 kb on + strand, within DvMF_2970 at 3745.974 kb on - strand, within DvMF_2970 at 3746.035 kb on - strand, within DvMF_2970 at 3746.037 kb on + strand, within DvMF_2970 at 3746.114 kb on - strand, within DvMF_2970 at 3746.344 kb on + strand, within DvMF_2970 at 3746.360 kb on - strand, within DvMF_2970 at 3746.362 kb on + strand, within DvMF_2970 at 3746.397 kb on + strand, within DvMF_2970 at 3746.444 kb on - strand, within DvMF_2970 at 3746.644 kb on - strand at 3746.715 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Carbenicillin 0.0625 mg/ml remove 3,743,622 + DvMF_2968 0.41 -0.2 3,743,728 + DvMF_2968 0.51 -0.2 3,744,104 - DvMF_2968 0.86 -0.1 3,744,555 + -0.6 3,744,566 - -0.5 3,744,679 - +0.1 3,744,731 - DvMF_2969 0.13 +0.2 3,744,804 - DvMF_2969 0.19 +1.9 3,744,939 + DvMF_2969 0.29 +1.7 3,744,992 - DvMF_2969 0.34 -0.4 3,744,992 - DvMF_2969 0.34 -0.1 3,745,136 + DvMF_2969 0.45 -1.4 3,745,502 + DvMF_2969 0.74 -0.7 3,745,640 + DvMF_2969 0.85 -0.5 3,745,954 + DvMF_2970 0.14 -0.2 3,745,974 - DvMF_2970 0.17 -0.3 3,746,035 - DvMF_2970 0.23 -0.3 3,746,037 + DvMF_2970 0.24 -0.4 3,746,114 - DvMF_2970 0.32 -0.4 3,746,344 + DvMF_2970 0.58 -0.1 3,746,360 - DvMF_2970 0.59 +1.8 3,746,362 + DvMF_2970 0.59 -0.0 3,746,397 + DvMF_2970 0.63 +0.0 3,746,444 - DvMF_2970 0.69 -0.2 3,746,644 - -0.1 3,746,715 + -0.1
Or see this region's nucleotide sequence