Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2968
Experiment: MoYLS4 with Carbenicillin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Carbenicillin 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,742,615 | - | DvMF_2967 | 0.58 | +0.3 | |
3,742,757 | + | DvMF_2967 | 0.73 | -0.4 | |
3,742,827 | - | DvMF_2967 | 0.81 | -2.0 | |
3,742,932 | + | -0.6 | |||
3,743,052 | - | -0.6 | |||
3,743,220 | + | -0.1 | |||
3,743,267 | - | +0.1 | |||
3,743,486 | + | DvMF_2968 | 0.28 | -0.2 | |
3,743,551 | - | DvMF_2968 | 0.35 | +0.0 | |
3,743,551 | - | DvMF_2968 | 0.35 | -0.2 | |
3,743,555 | + | DvMF_2968 | 0.35 | -0.6 | |
3,743,555 | + | DvMF_2968 | 0.35 | +0.5 | |
3,743,622 | + | DvMF_2968 | 0.41 | -0.2 | |
3,743,728 | + | DvMF_2968 | 0.51 | -0.2 | |
3,744,104 | - | DvMF_2968 | 0.86 | -0.1 | |
3,744,555 | + | -0.6 | |||
3,744,566 | - | -0.5 | |||
3,744,679 | - | +0.1 | |||
3,744,731 | - | DvMF_2969 | 0.13 | +0.2 | |
3,744,804 | - | DvMF_2969 | 0.19 | +1.9 | |
3,744,939 | + | DvMF_2969 | 0.29 | +1.7 | |
3,744,992 | - | DvMF_2969 | 0.34 | -0.4 | |
3,744,992 | - | DvMF_2969 | 0.34 | -0.1 | |
3,745,136 | + | DvMF_2969 | 0.45 | -1.4 |
Or see this region's nucleotide sequence