Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2883

Experiment: MoYLS4 with Carbenicillin 0.0625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_2882 and rplS are separated by 276 nucleotidesrplS and DvMF_2884 are separated by 55 nucleotides DvMF_2882: DvMF_2882 - Ribonuclease H (RefSeq), at 3,639,113 to 3,639,991 _2882 DvMF_2883: rplS - 50S ribosomal protein L19 (RefSeq), at 3,640,268 to 3,640,615 rplS DvMF_2884: DvMF_2884 - tRNA (guanine-N1)-methyltransferase (RefSeq), at 3,640,671 to 3,641,966 _2884 Position (kb) 3640 3641Strain fitness (log2 ratio) -1 0 1at 3639.279 kb on + strand, within DvMF_2882at 3639.282 kb on - strand, within DvMF_2882at 3639.356 kb on - strand, within DvMF_2882

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Carbenicillin 0.0625 mg/ml
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3,639,279 + DvMF_2882 0.19 -0.1
3,639,282 - DvMF_2882 0.19 +0.0
3,639,356 - DvMF_2882 0.28 -0.1

Or see this region's nucleotide sequence