Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2457
Experiment: MoYLS4 with Carbenicillin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Carbenicillin 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,099,121 | - | DvMF_2456 | 0.21 | -0.8 | |
3,099,219 | - | DvMF_2456 | 0.34 | -0.1 | |
3,099,404 | + | DvMF_2456 | 0.58 | -1.1 | |
3,099,412 | - | DvMF_2456 | 0.59 | -0.0 | |
3,099,493 | - | DvMF_2456 | 0.69 | -0.4 | |
3,099,530 | - | DvMF_2456 | 0.74 | -0.7 | |
3,099,537 | + | DvMF_2456 | 0.75 | +0.9 | |
3,099,545 | - | DvMF_2456 | 0.76 | -0.5 | |
3,099,560 | - | DvMF_2456 | 0.78 | -0.5 | |
3,100,027 | - | DvMF_2457 | 0.31 | +1.1 | |
3,100,027 | - | DvMF_2457 | 0.31 | +0.0 | |
3,100,067 | + | DvMF_2457 | 0.52 | +0.3 | |
3,100,439 | + | -0.5 | |||
3,100,512 | - | -0.7 | |||
3,100,839 | - | -0.9 | |||
3,101,009 | + | DvMF_2458 | 0.15 | +0.0 |
Or see this region's nucleotide sequence