Experiment: MoYLS4 with Carbenicillin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2449 and DvMF_2450 are separated by 96 nucleotides DvMF_2450 and DvMF_2451 are separated by 81 nucleotides
DvMF_2449: DvMF_2449 - formamidopyrimidine-DNA glycosylase (RefSeq), at 3,083,870 to 3,084,880
_2449
DvMF_2450: DvMF_2450 - ComEC/Rec2-related protein (RefSeq), at 3,084,977 to 3,088,279
_2450
DvMF_2451: DvMF_2451 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase (RefSeq), at 3,088,361 to 3,089,614
_2451
Position (kb)
3084
3085
3086
3087
3088
3089 Strain fitness (log2 ratio)
-1
0
1 at 3083.998 kb on + strand, within DvMF_2449 at 3084.056 kb on + strand, within DvMF_2449 at 3084.571 kb on + strand, within DvMF_2449 at 3084.770 kb on - strand, within DvMF_2449 at 3084.843 kb on + strand at 3084.954 kb on + strand at 3085.083 kb on + strand at 3085.591 kb on + strand, within DvMF_2450 at 3085.806 kb on + strand, within DvMF_2450 at 3085.929 kb on + strand, within DvMF_2450 at 3085.987 kb on - strand, within DvMF_2450 at 3086.326 kb on - strand, within DvMF_2450 at 3086.358 kb on + strand, within DvMF_2450 at 3086.466 kb on - strand, within DvMF_2450 at 3086.556 kb on + strand, within DvMF_2450 at 3086.682 kb on + strand, within DvMF_2450 at 3086.695 kb on - strand, within DvMF_2450 at 3086.778 kb on + strand, within DvMF_2450 at 3086.791 kb on - strand, within DvMF_2450 at 3086.892 kb on + strand, within DvMF_2450 at 3086.892 kb on + strand, within DvMF_2450 at 3086.900 kb on - strand, within DvMF_2450 at 3086.900 kb on - strand, within DvMF_2450 at 3086.967 kb on - strand, within DvMF_2450 at 3087.037 kb on + strand, within DvMF_2450 at 3087.045 kb on - strand, within DvMF_2450 at 3087.246 kb on - strand, within DvMF_2450 at 3087.500 kb on + strand, within DvMF_2450 at 3087.509 kb on - strand, within DvMF_2450 at 3088.342 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Carbenicillin 0.0625 mg/ml remove 3,083,998 + DvMF_2449 0.13 -0.6 3,084,056 + DvMF_2449 0.18 +0.3 3,084,571 + DvMF_2449 0.69 -1.2 3,084,770 - DvMF_2449 0.89 -0.4 3,084,843 + +0.1 3,084,954 + -0.4 3,085,083 + -0.8 3,085,591 + DvMF_2450 0.19 +1.5 3,085,806 + DvMF_2450 0.25 -0.3 3,085,929 + DvMF_2450 0.29 -1.4 3,085,987 - DvMF_2450 0.31 -0.5 3,086,326 - DvMF_2450 0.41 -0.4 3,086,358 + DvMF_2450 0.42 +0.3 3,086,466 - DvMF_2450 0.45 -0.5 3,086,556 + DvMF_2450 0.48 -0.5 3,086,682 + DvMF_2450 0.52 -0.7 3,086,695 - DvMF_2450 0.52 -0.9 3,086,778 + DvMF_2450 0.55 -0.4 3,086,791 - DvMF_2450 0.55 -0.5 3,086,892 + DvMF_2450 0.58 -0.3 3,086,892 + DvMF_2450 0.58 +0.6 3,086,900 - DvMF_2450 0.58 +0.3 3,086,900 - DvMF_2450 0.58 +0.5 3,086,967 - DvMF_2450 0.60 -0.1 3,087,037 + DvMF_2450 0.62 +0.0 3,087,045 - DvMF_2450 0.63 +1.2 3,087,246 - DvMF_2450 0.69 -0.3 3,087,500 + DvMF_2450 0.76 -0.8 3,087,509 - DvMF_2450 0.77 +0.5 3,088,342 - -1.4
Or see this region's nucleotide sequence