Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_R0061

Experiment: MoYLS4 with Carbenicillin 0.0625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_2222 and DvMF_2223 are separated by 263 nucleotidesDvMF_2223 and DvMF_R0061 are separated by 112 nucleotidesDvMF_R0061 and DvMF_2224 are separated by 97 nucleotides DvMF_2222: DvMF_2222 - protein of unknown function DUF214 (RefSeq), at 2,781,487 to 2,784,294 _2222 DvMF_2223: DvMF_2223 - diacylglycerol kinase (RefSeq), at 2,784,558 to 2,784,920 _2223 DvMF_R0061: DvMF_R0061 - tRNA-Lys (RefSeq), at 2,785,033 to 2,785,108 _R0061 DvMF_2224: DvMF_2224 - seryl-tRNA synthetase (RefSeq), at 2,785,206 to 2,786,483 _2224 Position (kb) 2785 2786Strain fitness (log2 ratio) -1 0 1at 2784.035 kb on - strandat 2784.102 kb on + strandat 2784.222 kb on - strandat 2784.369 kb on - strandat 2784.503 kb on + strandat 2784.555 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Carbenicillin 0.0625 mg/ml
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2,784,035 - -0.1
2,784,102 + -0.3
2,784,222 - +0.6
2,784,369 - -0.4
2,784,503 + -0.4
2,784,555 + -0.0

Or see this region's nucleotide sequence