Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2175
Experiment: MoYLS4 with Carbenicillin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Carbenicillin 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,711,470 | + | DvMF_2174 | 0.22 | +0.6 | |
2,711,621 | - | DvMF_2174 | 0.40 | -0.2 | |
2,711,806 | + | DvMF_2174 | 0.61 | -0.1 | |
2,711,960 | + | DvMF_2174 | 0.80 | -0.4 | |
2,712,061 | - | -0.8 | |||
2,712,293 | - | -0.6 | |||
2,712,341 | - | -0.5 | |||
2,712,375 | + | -0.5 | |||
2,712,602 | - | DvMF_2175 | 0.11 | -0.9 | |
2,712,610 | - | DvMF_2175 | 0.12 | -0.1 | |
2,712,724 | + | DvMF_2175 | 0.19 | -0.2 | |
2,712,775 | + | DvMF_2175 | 0.23 | -0.4 | |
2,712,825 | - | DvMF_2175 | 0.26 | -0.5 | |
2,712,995 | + | DvMF_2175 | 0.38 | -1.0 | |
2,713,028 | + | DvMF_2175 | 0.40 | -0.2 | |
2,713,059 | - | DvMF_2175 | 0.42 | -0.1 | |
2,713,059 | - | DvMF_2175 | 0.42 | -0.4 | |
2,713,095 | + | DvMF_2175 | 0.44 | -0.1 | |
2,713,186 | - | DvMF_2175 | 0.50 | -0.4 | |
2,713,442 | - | DvMF_2175 | 0.67 | -0.6 | |
2,713,473 | - | DvMF_2175 | 0.69 | -0.6 | |
2,713,506 | + | DvMF_2175 | 0.72 | -0.1 | |
2,713,744 | - | DvMF_2175 | 0.88 | -0.4 | |
2,714,464 | + | -0.6 | |||
2,714,464 | + | -0.5 | |||
2,714,465 | - | +0.7 | |||
2,714,734 | + | -0.5 | |||
2,714,897 | + | -0.3 |
Or see this region's nucleotide sequence