Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1849
Experiment: MoYLS4 with Carbenicillin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Carbenicillin 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,260,152 | + | DvMF_1848 | 0.21 | -0.4 | |
2,260,256 | + | DvMF_1848 | 0.30 | -0.4 | |
2,260,438 | - | DvMF_1848 | 0.46 | -0.4 | |
2,260,593 | + | DvMF_1848 | 0.59 | -0.0 | |
2,260,593 | + | DvMF_1848 | 0.59 | -0.3 | |
2,260,616 | + | DvMF_1848 | 0.61 | -0.4 | |
2,260,679 | - | DvMF_1848 | 0.67 | -0.5 | |
2,260,681 | + | DvMF_1848 | 0.67 | +0.2 | |
2,260,681 | + | DvMF_1848 | 0.67 | -0.4 | |
2,260,703 | + | DvMF_1848 | 0.69 | -0.4 | |
2,260,704 | - | DvMF_1848 | 0.69 | -0.2 | |
2,260,890 | - | DvMF_1848 | 0.85 | -0.2 | |
2,261,363 | + | DvMF_1849 | 0.33 | -0.7 | |
2,261,363 | - | DvMF_1849 | 0.33 | -0.3 | |
2,261,806 | + | DvMF_1849 | 0.80 | -0.7 | |
2,261,927 | + | -1.1 | |||
2,261,964 | + | -0.1 | |||
2,261,972 | - | +0.4 | |||
2,261,972 | - | -0.4 | |||
2,262,085 | + | -0.2 | |||
2,262,095 | + | -0.6 | |||
2,262,103 | - | -0.2 | |||
2,262,555 | + | DvMF_1850 | 0.37 | -0.3 | |
2,262,661 | - | DvMF_1850 | 0.44 | +1.2 | |
2,262,949 | - | DvMF_1850 | 0.63 | -0.4 |
Or see this region's nucleotide sequence